Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq994 347 4e-90 seq1160 156 1e-32 seq883 156 1e-32 seq256 84.2 7e-11 >seq994 Length=146303 Score = 347 bits (384), Expect = 4e-90 Identities = 968/1474 (66%), Gaps = 22/1474 (1%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||| ||||||| || || || || || | | | | | |||| || | Sbjct 80969 ATAGGTATCGATCTAGGTACAACCTACTCATGCGTCGGCATCTTCCGAGATGACCGCATC 81028 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || ||||| || || || || ||| |||| || || || | ||| || |||||||| Sbjct 81029 GAGATCATTGCCAACGACCAGGGCAACCGAACCACTCCCTCCTTCGTCGCCTTTACCGAC 81088 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| | |||||||| || || || || |||| ||| || || | || || Sbjct 81089 ACCGAGCGTCTCATTGGTGACTCCGCGAAGAACCAAGTTGCCATGAACCCCCAGAACACC 81148 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTACACAA 349435 || ||||| || ||||| | || || | ||||| | |||| | | || Sbjct 81149 GTCTTTGACGCCAAGCGCTTGATCGGCCGGAAGTTCAATGATCCTGA---AGTT---CAG 81202 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 ||||| | ||||| || || || | ||||| | | ||| |||| || || | || Sbjct 81203 GCTGATATGAAACACTTCCCATTCAAGGTTGT-CGACAAG--GGTGGCAAGCCCGTCGTT 81259 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 || || || | || || || ||||||||| ||||||||||| ||||| ||||| Sbjct 81260 GAAGTGGAGTTCAAGGGCGAGATAAAACAATTCACTCCCGAAGAAATCTCATCCATGGTG 81319 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || || |||| |||| |||||| | ||| | || | || || | | ||||| Sbjct 81320 TTGACCAAGATGAGAGAAACCGCTGAATCGTATCTTGGAGGTACGGTCAACAACGCTGTC 81379 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || ||||| || || || || || || | |||||| || || || ||||| || | Sbjct 81380 ATCACTGTCCCTGCATACTTCAACGACTCTCAGCGTCAAGCCACCAAGGATGCCGGTCTC 81439 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || | ||||| || | || || || |||||||| || || || ||||| || Sbjct 81440 ATTGCCGGTCTCAATGTCCTCCGTATCATCAACGAACCCACCGCGGCTGCCATTGCCTAC 81499 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || |||||||| | | ||| || || | | || || ||| | ||||||||| Sbjct 81500 GGTCTTGATAAGAAGGCTGAGGGTGAGCGCAACGTCTTGATCTTCGATCTTGGTGGTGGT 81559 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||| ||||| || || | || |||||||||| || || ||||| || | |||||| Sbjct 81560 ACTTTCGATGTGTCGCTCTTGACCATTGAAGAGGGTATCTTCGAAGTCAAGTCCACTGCT 81619 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 |||||||| || || ||||| || || ||||| || || ||||| || || || || Sbjct 81620 GGTGATACTCACCTGGGTGGTGAGGACTTTGACAACCGCCTCGTCAACCACTTCGTCAAC 81679 Query 349916 GAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 ||||| ||||| ||||| || | ||| | ||| || | || | || || || Sbjct 81680 GAATTCAAGCG-CAAGCACAAGAAGGATCTCTCCTCCAATGCTCGTGCTCTCCGACGTCT 81738 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 ||||||| || || || || ||||| | | || ||| | | || || || ||||| Sbjct 81739 CCGAACTGCTTGCGAGCGGGCCAAGCGCACTCTTTCTTCTTCCGCTCAGACTTCCATTGA 81798 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 || || || || ||| |||| ||||||| | || || || ||||| || || || Sbjct 81799 GATCGACTCGCTCTATGAGGGCATTGATTTCTACACCTCCATCACTCGTGCCCGTTTCGA 81858 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 |||| | || ||| || || | | || ||||| || || ||| || | || Sbjct 81859 AGAACTCTGCCAGGACCTCTTCCGCTCTACCATGGAGCCGGTTGAACGTGTCCTTCGCGA 81918 Query 350155 TGCAAAAAT-GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 ||| || || | | | || | | | ||| | || | || || || || || || | Sbjct 81919 TGCCAAGATCGACAAGTCCTCCG-TCCACGAAATCGTCCTGGTCGGAGGCTCCACGCGGA 81977 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA 350273 | || | || | | | || || || || |||||||| ||||| | || | Sbjct 81978 TCCCTCGCATCCAGAAACTCGTTTCCGATTTCTTCAATGGCAAGGAACCCAACAAGTCGA 82037 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| || ||||| || ||||||||||| |||||| |||| | || || Sbjct 82038 TCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCTGTCCAGGCAGCTATCCTCTCCGGTG 82097 Query 350334 ATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTG 350390 | | ||||| || | | || | || || || ||||| | ||| | || || | Sbjct 82098 ACACCAGTTCCAAGTCTACCAACGAAATCTTGCTTCTCGATGTTGCGCCATTGTCTCTCG 82157 Query 350391 GATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTA 350450 | | || ||| | || | || |||||| ||| || | || | ||| || || | Sbjct 82158 GTATCGAGACTGCCGGCGGTGTCATGACTCCTCTCATCAAGCGCAACACTACCGTCCCGA 82217 Query 350451 CAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAG 350510 | || |||||| | ||||| || || || | || || ||||||| || || |||| Sbjct 82218 CCAAGAAGTCCGAGACTTTCTCCACCTTCTCCGACAACCAGCCAGGTGTGCTCATCCAAG 82277 Query 350511 TATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAA 350570 | | || ||||| |||||||| || || || || || || || |||| || Sbjct 82278 TCTACGAGGGTGAGCGTGCTCGTACCAAGGACAACAACTTGCTCGGCAAATTCGAACTTT 82337 Query 350571 GTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATT 350630 | |||||||| || | || ||||| |||||||| ||| | |||||| ||||| Sbjct 82338 CCGGTATTCCACCTGCTCCCCGTGGTGTTCCCCAGATTGAGGTCACCTTCGATGTTGATG 82397 Query 350631 CAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 | || ||||| | || || |||| ||||| || Sbjct 82398 CCAACGGTATCATGAACGTCTCCGCCGTTGAGAA 82431 >seq1160 Length=134009 Score = 156 bits (172), Expect = 1e-32 Identities = 250/357 (70%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 |||||||||||||| | |||||||| | || |||||||| | || || ||||| | Sbjct 80242 CCCGAAGAAATTTCGGCCATGGTTTTGGGCAAGATGAAGGAGGTCGCAGAGGCATACCTG 80183 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || || | ||| || | || || | || || || || || || || || |||| | Sbjct 80182 GGCGAGAAAGTCACCCACGCAGTGGTCACGGTTCCGGCATACTTCAACGACAACCAGAGA 80123 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || ||||| ||||| | |||||| || || | |||||| || || | |||||| Sbjct 80122 CAGGCGACCAAAGACGCTGGTACCATTGCTGGTTTGACTGTTCTCCGAGTGGTCAATGAA 80063 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 |||||||| || ||||| || || || | || || | || || |||| | | || Sbjct 80062 CCCACTGCCGCCGCAATCGCCTACGGTTTGGACAAGA--AGGGA-AAAGAGAGCCAGATC 80006 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 | | | ||| | ||||||||||| || ||||| ||||| || | ||||||| || Sbjct 80005 ATCGTCTACGATCTTGGTGGTGGTACATTCGATGTCTCACTCCTCTCGATTGAAGATGGT 79946 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 |||| || || || || ||||||||||| ||||| ||||| || ||||||||| Sbjct 79945 GTTTTCGAGGTCTTGGCGACCGCTGGTGATACTCATCTGGGTGGGGAGGATTTTGAT 79889 >seq883 Length=160511 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || |||| || || ||||| ||||| ||||| || || || ||||| || Sbjct 38146 CATGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTC 38087 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | ||||| || ||||| | |||||||||||| ||||| | ||||| || || || Sbjct 38086 GCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGG 38027 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||||||||| || || ||||| || | ||||||||| || |||| || |||| ||| Sbjct 38026 CGGAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTC 37967 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| ||||| | ||||| || || | || || ||||| || ||||| Sbjct 37966 CACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916 Score = 147 bits (162), Expect = 7e-30 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 |||| ||||||||| | ||| | || | ||| ||||| ||| || |||||||| || Sbjct 38377 TTACTGACCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTA 38318 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 ||||| | || || |||||||| | ||| || || |||||||| | || || ||||| Sbjct 38317 GTCAGAAAGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATC 38258 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 || ||||| || ||||||||||| || || | || || || ||||| | || || | Sbjct 38257 CGGTGGAATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGA 38198 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| | |||| ||||||||||| | || || ||||| |||||||| Sbjct 38197 TTCAACTTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144 Score = 134 bits (148), Expect = 4e-26 Identities = 173/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || |||||||| || |||||||| || || | Sbjct 37922 TTTGCATACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGT 37863 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||| | || || || ||||| ||||| || || ||||| || |||||||| || | Sbjct 37862 AGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGT 37803 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| ||||| || ||||| || || | || ||||| || || | ||| | || Sbjct 37802 CGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATC-GCTG 37744 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || ||||| || | ||||| ||||| || || || || || || ||||| Sbjct 37743 GACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688 Score = 132 bits (146), Expect = 1e-25 Identities = 158/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | ||| | ||||| ||||| ||||| || | Sbjct 37694 TTTGCATACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGT 37635 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||| || || || ||||| || || ||||| || || || || |||||||| |||| Sbjct 37634 AATCACTCAAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGAT 37575 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| || |||||||| || | |||||||| || || | ||| | || Sbjct 37574 CAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATC-GCTG 37516 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | ||||| ||||| Sbjct 37515 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 37484 >seq256 Length=205955 Score = 84.2 bits (92), Expect = 7e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || ||||| || ||||| || || || || | || || |||||||||||||| || || Sbjct 110792 GTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCTTCAAGTTGCTTGCCG 110733 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644 || ||||| || |||||||| |||||||| || ||||| || || Sbjct 110732 GCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTC 110689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515225764059425