Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq73 194 2e-44
seq738 109 6e-19
>seq73
Length=89549
Score = 194 bits (214), Expect = 2e-44
Identities = 467/699 (67%), Gaps = 6/699 (1%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||| ||| || | ||| ||| |||| ||| || |||||| | ||||| ||||||||
Sbjct 16927 GAGACCTACAACCTCATGTCCCAGAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAAT 16986
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|| || || || ||||| |||| |||||| |||| | ||||| || |||
Sbjct 16987 GCCGGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGC 17046
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
|| || || || ||||| || |||||| ||||| ||||||||| | || |||
Sbjct 17047 ATTGAGGGAATTTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGGT 17106
Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| || || || |||| | | ||||| | || | || ||||| |||||
Sbjct 17107 ATTGGCCTCAAC-GCTCATTGCATTCGTGCTACTGGTTCCTATATTGCCGGGACCAACGG 17165
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| || |||| || | || ||||| || |||||||||||||| ||||| || || |
Sbjct 17166 CACTTCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGA 17225
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
||||||||| ||||| || | || |||||||| || ||||| |||||||| ||
Sbjct 17226 CCAGGGTGGCAATAAGCGTCCCGGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGA 17285
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGA 53661
| | || | || | ||| | ||| || || | |||||| | ||| ||||||
Sbjct 17286 TGTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGA 17345
Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGA 53721
| ||||| || || |||| |||||| || |||||| | || |||||| || | ||
Sbjct 17346 CTTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAGA 17405
Query 53722 GTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
||| ||| | || || | ||| || ||||| | |||||| || ||||| ||
Sbjct 17406 CTGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATT 17465
Query 53782 TAACGAGATGTATCGGAC-GTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840
| | | ||| | || ||| | |||| || ||| ||||||||| |
Sbjct 17466 CGATGCCCTCTAT-GAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGGTCAAGGCCC 17524
Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTGC 53899
|| | ||| |||| ||||| | ||| ||| ||||| || || || || |||
Sbjct 17525 AGAAGTTGTGGTATGCGATCCT-AGAAGCACAGACCGAGACCGGGACTCCTTATATGCTT 17583
Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||||| | |||| ||||||||||||||||||||
Sbjct 17584 TACAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAAC 17622
Score = 84.2 bits (92), Expect = 2e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || || || || || ||||| || || || || |||| ||| ||||||||
Sbjct 18148 CGCAACTCTCTCCTTGTTGCCCCTATGCCTACTGCATCCACCTCTCAAATCTTGGGCAAC 18207
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
||||| |||||||| |||||| |||||||||||
Sbjct 18208 AACGAATGCTTCGAGCCATACACGTCCAACATCTAC 18243
>seq738
Length=55810
Score = 109 bits (120), Expect = 6e-19
Identities = 296/451 (66%), Gaps = 4/451 (1%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| || ||||| || || ||||| |||||||||||||| || || | || | || |||
Sbjct 19447 CCTGTTCCGATACCGTCGGCACCATTGACCAGAATCATGGGAACGACTGGCACATATAAC 19506
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995
||||| || | || | ||||||| | ||| |||| | | | |||||| |
Sbjct 19507 TCCGGTTCGATCTTCTTGTCGTCATCAGTGTTGTAAGTCAAGAGAGGTTCATCAGCCTGG 19566
Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055
| ||| | | || | | ||| || ||| ||||| || ||||| | ||| || |
Sbjct 19567 TGGAAGAGCTTCCGGGCGAAGGGAGACAGACGGGTGAAAATATATCGAGCGCTAGCAGAG 19626
Query 152056 TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTG 152115
|| | || ||| ||||| || ||||| || || |||||||| | ||||| |||
Sbjct 19627 TCGCTACCTCCTTGATTTCGCGTGCCGAACTGGCCGGATGGCTCGAGCAAGTTGACATTG 19686
Query 152116 TTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCG 152175
|||| || || ||||| ||||||| | || || || ||| || ||| || |||
Sbjct 19687 TTGGATCCGACAAAATTTTGAGCCAGACCAACGATGGTCTGCTGGAGCGACGCCTCGCCG 19746
Query 152176 TGGTGATACGCCGTC--TGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233
|| ||||| |||||| | | ||| | | || || | | || || ||||| ||
Sbjct 19747 TGATGATAAGCCGTCATTCCACCGACAAG--ACCGGCGAGTTCGGCGACTTTCATATCTT 19804
Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGT 152293
|| ||| ||| |||| || ||| | || ||||| ||||| || ||||| || |
Sbjct 19805 TCTTCAAGTTTCGTTTGAAGCAAGCGAACATAACCTTTCGCTGACCAGGCTTCAACCCAT 19864
Query 152294 CCACCACGTGAGGAATCGAACGCTTGATGTC 152324
| || || || ||||| || || ||||
Sbjct 19865 CGACAACAGAGGGGATCGATCGTATGTTGTC 19895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547205910705000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |