Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq883 203 4e-47
seq73 178 1e-39
seq738 138 1e-27
>seq883
Length=160511
Score = 203 bits (224), Expect = 4e-47
Identities = 181/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||| |
Sbjct 37688 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37747
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| ||||| | || || ||||||||||| || |||||||| |||||
Sbjct 37748 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37807
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| |||||||| || ||||||||||| || | || || || ||||| ||
Sbjct 37808 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37867
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||| ||||| |||||||| || ||| | ||||| || |||||
Sbjct 37868 ATCCAAAAAGAATCGACTCTTCACCTGGTCCTTCGTCTCCGTGGTGG 37914
Score = 129 bits (142), Expect = 7e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| | || |||||||| || || || || || || |||
Sbjct 37916 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37975
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | || | || ||||| |||||||| |||||||| || |||||
Sbjct 37976 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 38035
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| || | || || ||||| || ||| | || || | ||| || || ||| ||||||||
Sbjct 38036 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGC-GACTATAA 38094
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||||| ||| | || | || |||||
Sbjct 38095 CATCCAGAAGGAGTCGACTCTCCATCTCGTCCTCCGATTGCGAGGTGG 38142
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| | ||||| ||||||||||| | || ||||| ||
Sbjct 38144 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCG 38203
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | || || ||||| || ||||| ||||| || || ||
Sbjct 38204 GACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAA 38263
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || ||||| || |||||| | || |||| || || || | ||||| |||
Sbjct 38264 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAAT 38323
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || ||||| |||||| ||| | || ||| | ||||| ||||| ||
Sbjct 38324 ATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACTTCGTGGTGGTCA 38373
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || || ||||| ||||| | |||| ||| | ||| | ||| |
Sbjct 37484 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 37543
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||||||||| || |||||||| || || || ||||| ||||| || || ||
Sbjct 37544 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 37603
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||||| || ||| | || || || | || || ||||| || | |||
Sbjct 37604 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCAT 37663
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
| ||| | || || || |||||
Sbjct 37664 TTGGTCCTTCGCCTCCGTGGTGG 37686
>seq73
Length=89549
Score = 178 bits (196), Expect = 1e-39
Identities = 648/1003 (65%), Gaps = 45/1003 (4%)
Strand=Plus/Minus
Query 80781 GGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAAC 80840
||| || || | ||||| |||| ||||||||| ||||| ||| || || || ||
Sbjct 17841 GGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTGACGAC 17782
Query 80841 CCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT---------TC-ACAA 80890
| ||||| |||||||| |||||| ||| | ||| || || |
Sbjct 17781 TTGGGTAACTTCATGAAGACGGCCAAAGTCATATT----CACCTCGGGCTTGATCGACGA 17726
Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAA 80947
| | ||||| ||| || || |||||||| || || | ||| || | || |||||
Sbjct 17725 AGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCA-CTGTA- 17668
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
|||||| ||||||||||||| ||| || | ||||| |||||||| ||||||||
Sbjct 17667 -CTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGC 17609
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| |||||| || |||||||| ||| || || || ||||||||| ||||| |
Sbjct 17608 TCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTCTGTGCTT 17549
Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127
||||| || | ||| | || | ||||||||| || || | || || |
Sbjct 17548 CTAGGATCGCATACCACAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCT 17489
Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187
|||||| | || | ||||| | | || | | |||| ||| | || ||
Sbjct 17488 CATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCT 17429
Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247
| | ||| || | ||| |||||| || ||||| ||| ||||||| || |
Sbjct 17428 CATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCG 17369
Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGC 81307
| |||| || || |||| ||| ||| ||| |||| || | || ||||| |
Sbjct 17368 GAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTC 17309
Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367
|| | || | || | || ||||| ||||||||||||||||| | ||| | | |
Sbjct 17308 TCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCAC 17249
Query 81368 CCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCA 81421
| | |||| ||||||||||| || ||||||||||| ||| || ||||| |
Sbjct 17248 C---GGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAA 17192
Query 81422 ACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGC 81481
||| || |||| ||||| || ||||| || || | ||| || || | || |
Sbjct 17191 GCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCAC 17132
Query 81482 GCACCTTGC--TGA---TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536
| | ||| ||| ||| || || || || || | ||| || ||| ||||||
Sbjct 17131 GAA---TGCAATGAGCGTTG--AGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACA 17077
Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596
|| | || || ||||||||||| ||||| || | ||||||||| | |||||| ||
Sbjct 17076 AGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCA 17017
Query 81597 GCTTGACATCTGAGGGCTTTTTGA--GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654
|||| ||||| || || ||||||||||||||| ||||| | ||||| ||
Sbjct 17016 TGAGGACAATTGAGG--TTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTG 16959
Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCGTG 81713
|| | | ||||| |||| ||||| || | | | | | || || || || ||
Sbjct 16958 AAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCG-ATGTCATCTCCATG 16900
Query 81714 AATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756
|| || | || |||||||| | ||||| || || |||||
Sbjct 16899 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCG 16857
>seq738
Length=55810
Score = 138 bits (152), Expect = 1e-27
Identities = 287/422 (68%), Gaps = 8/422 (2%)
Strand=Plus/Minus
Query 31993 AAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATG 32052
|||||| ||||| ||||| || | ||| ||| |||| ||| || || || |||
Sbjct 19856 AAGCCTGGTCAGCGAAAGGTTATGTTCGCTTGCTTCAAACGAAACTTGAAGAAAGATATG 19797
Query 32053 AAGGTGGCGCAGCT-GTCGGGCTACGTGGCAGAGCAA--ACGGCCTATCACCACGGCGAG 32109
|| || || | || | ||| || || | | | || ||||| ||||| |||||||||
Sbjct 19796 AAAGTCGCCGAACTCGCCGGTCT---TGTCGGTGGAATGACGGCTTATCATCACGGCGAG 19740
Query 32110 GCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTG 32169
|||||||||||| ||||| || || ||||| || |||||||| | || || |
Sbjct 19739 GCGTCGCTCCAGCAGACCATCGTTGGTCTGGCTCAAAATTTTGTCGGATCCAACAATGTC 19680
Query 32170 AACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCG 32229
||||| ||||||||||| || ||||| || || || || || | || ||||
Sbjct 19679 AACTTGCTCGAGCCATCCGGCCAGTTCGGCACGCGAAATCAAGGAGGTAGCGACTCTGCT 19620
Query 32230 AGCTCCCGTTACATCTTCACCCGTCTCGC-ACCTTCGACGCGCAAGATTTTCGACCCGTC 32288
||| | || || || ||||||||||| | |||||| | || ||| | ||| ||| | |
Sbjct 19619 AGCGCTCGATATATTTTCACCCGTCTGTCTCCCTTCG-CCCGGAAGCTCTTCCACCAGGC 19561
Query 32289 GGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTA 32348
|| || | | | | ||||| |||||||| || | |||| |||| ||| ||
Sbjct 19560 TGATGAACCTCTCTTGACTTACAACACTGATGACGACAAGAAGATCGAACCGGAGTTATA 19501
Query 32349 CAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGGGTTCAG 32408
|| || |||| ||||| |||| || ||||| || || |||||||| || | ||
Sbjct 19500 TGTGCCAGTCGTTCCCATGATTCTGGTCAATGGTGCCGACGGTATCGGAACAGGCTGGAG 19441
Query 32409 TT 32410
||
Sbjct 19440 TT 19439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570299884902000
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