Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq883 89.7 4e-13
>seq883
Length=160511
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132
||||||||||| || |||||||| || || ||||| || || | ||| || ||| | ||
Sbjct 38355 AACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATCT 38296
Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192
|| | || ||||| ||||| || | ||||| || || | || | | |||||| |||
Sbjct 38295 TCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATCC 38236
Query 39193 ATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251
||| || |||| ||| | | | || || || || || |||| ||| ||| |
Sbjct 38235 TGGATCTTTGACTTGA-CGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGT 38177
Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| |||| || || |||||||| |||||
Sbjct 38176 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429537878246675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |