Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq789 87.8 1e-12 >seq789 Length=50723 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/176 (73%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 48513 CAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CTTCA 48571 |||||| | |||||||| || | || |||| ||||||||||||||||| | || Sbjct 12592 CAAGGTACGCGTGAGGACCATCAAGGTTCCCCAGATTGGTGACAAGTTTGCGTCGCGCCA 12533 Query 48572 CGGCGCAAAAGGGGACATGTGGAGCCGTCCTGAC-CCAGGAGGACATGCCCTTCGACAAG 48630 ||| |||||||| || ||| | ||| | ||||||||| ||||| ||| || Sbjct 12532 TGGC-CAAAAGGGTACCATTGGTATCA-CCTACCGCCAGGAGGATATGCCTTTCACCAGA 12475 Query 48631 GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686 || ||| | || || || ||||||||||| || |||||| ||||||| | ||||| Sbjct 12474 GAGGGGATTGTCCCTGATCTCATCATCAATCCACACGCCATTCCCTCTCGCATGAC 12419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369500557530725