Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq73 223 5e-53
>seq73
Length=89549
Score = 223 bits (246), Expect = 5e-53
Identities = 1151/1825 (63%), Gaps = 21/1825 (1%)
Strand=Plus/Minus
Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871
||||| || |||||||| ||||| || || |||| |||| || ||| |||||| |
Sbjct 18590 GTACGGAGGTAGTACATTCCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGAT 18531
Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931
|| | ||| | | || || | ||| || || | || || |||||| |||
Sbjct 18530 GTGATCTTGCCCATAGTGGGCTCCTTGAGATGGATGTTGAGAGATTGGGATTGATCAATG 18471
Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991
||||| || | ||||| ||||| | | | ||| ||| |||||||| | ||
Sbjct 18470 AAAGCACCACGGTCAGCAGCCATCTGGAGGACGGTGCGTTGGCTGATTTCCCAGACCGTC 18411
Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048
||| | | |||||| ||| | || | ||| | | || |||||||| || || ||
Sbjct 18410 TTGTATAGAGCTTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCC 18351
Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108
| || ||| | ||||| || | || ||| | || ||| | | | |
Sbjct 18350 GCAATGATTCTGTTCTTCATGTTGTCGGACCAGAGACCAAGGTCAACCAAATCCTTCAAG 18291
Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168
|| ||||| || | ||| ||||| |||| ||| || | ||| | ||| || ||
Sbjct 18290 AGCCAGGGATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGAC 18231
Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228
|| ||||| || | |||| ||||| ||||| ||||||| || || ||||| ||||||
Sbjct 18230 GTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATA 18171
Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288
|| || || | | | || | | ||||||| | || | | |||| | | |
Sbjct 18170 GGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATCC 18111
Query 77289 CAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA 77348
|||||||| ||||||||||| ||||| ||| | ||| || || || || || || |
Sbjct 18110 CAATCCCATAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACC-TTGTGA 18052
Query 77349 GCATATGAT-CCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGC 77407
| | | || | ||| || ||||| || |||| | | || ||||| || |||
Sbjct 18051 GACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGC 17992
Query 77408 TTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAAT 77467
|| ||| | | || || ||||||||||| | | ||||| | | || ||
Sbjct 17991 AGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGG 17932
Query 77468 ACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACC 77527
| || || ||| | | ||| || ||||||||||| | |||||||| |||| |||
Sbjct 17931 AGAGTCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACC 17872
Query 77528 AATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTC 77587
|| ||||| |||| ||| | | ||||| || | ||| || || || || ||
Sbjct 17871 AACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATC 17812
Query 77588 TATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC 77647
|| || || || | |||| | || |||| || || | || ||| ||
Sbjct 17811 GATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGTC 17752
Query 77648 AAAT---CTTCCATCT--AT-AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAAC 77701
| || | || || || || || | | ||| | ||| || ||||| || ||
Sbjct 17751 ATATTCACCTCGGGCTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGAC 17692
Query 77702 TGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTACATTT 77758
|| | ||||| | |||| || | | || || || || ||||| |
Sbjct 17691 AGCGATCTCAT---CTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCG 17635
Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818
||| || ||||| || | ||||||||||| || ||||| | ||||| ||||| ||| |
Sbjct 17634 GATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATA 17575
Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGAC-TCT-AGCTTTT 77876
||||||||||| || |||||| ||| | || | | || || || ||| || ||
Sbjct 17574 AGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACC--ACAACTTCTGGGCCTTG 17517
Query 77877 ATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCT 77936
| | | ||| | |||| | ||||| || ||| || || ||||| ||
Sbjct 17516 ACCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCG 17457
Query 77937 CCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCT 77996
|| | |||||| | | || || |||| || || | || | |||||| |
Sbjct 17456 CCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTC 17397
Query 77997 TCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 78056
| || || ||| |||| || ||||| || |||| || ||| ||| | || ||||
Sbjct 17396 TTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCG 17337
Query 78057 CTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGC 78116
| | ||||| ||||| |||||| | || | || | || | | ||| | |||
Sbjct 17336 CGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGC 17277
Query 78117 CATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATAT 78176
||||| || ||||| || || | | || || || ||||| || ||||| || | |||
Sbjct 17276 CATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAA 17217
Query 78177 CTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTT 78236
| ||| ||||| || | || | | ||| ||||| | ||| || || || || || ||
Sbjct 17216 CGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTC 17157
Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCC 78296
|| | |||||| ||| | || ||||| | | | | || || || || ||
Sbjct 17156 CCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGCCAGCA 17097
Query 78297 ATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356
|||| || || | ||| ||| || | || ||||| || ||||| || ||||| ||
Sbjct 17096 GTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCT 17037
Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416
|||||| | | || || |||| |||| | || ||| || ||||| || |
Sbjct 17036 TTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGA 16977
Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476
|| ||||| || || || || || || | || | || ||||| || || || ||
Sbjct 16976 GTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTC 16917
Query 78477 TCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCA 78536
|| ||||| | ||| || || || || |||||||| | ||| || || ||||| ||
Sbjct 16916 TCGATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCG 16857
Query 78537 ACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAG 78596
|| | || || || | || |||||| |||||||||| || || || || ||
Sbjct 16856 GCCACTTGTTTGCCAATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTAT 16797
Query 78597 TTGTATGAAAAGTCTCTCTCGTAAA 78621
| ||| ||||||| |||||||
Sbjct 16796 TGGTAGTTGAAGTCTCGGTCGTAAA 16772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694655992044000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |