Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq73 223 5e-53 >seq73 Length=89549 Score = 223 bits (246), Expect = 5e-53 Identities = 1151/1825 (63%), Gaps = 21/1825 (1%) Strand=Plus/Minus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||| || |||||||| ||||| || || |||| |||| || ||| |||||| | Sbjct 18590 GTACGGAGGTAGTACATTCCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGAT 18531 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| | | || || | ||| || || | || || |||||| ||| Sbjct 18530 GTGATCTTGCCCATAGTGGGCTCCTTGAGATGGATGTTGAGAGATTGGGATTGATCAATG 18471 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 ||||| || | ||||| ||||| | | | ||| ||| |||||||| | || Sbjct 18470 AAAGCACCACGGTCAGCAGCCATCTGGAGGACGGTGCGTTGGCTGATTTCCCAGACCGTC 18411 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| | | |||||| ||| | || | ||| | | || |||||||| || || || Sbjct 18410 TTGTATAGAGCTTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCC 18351 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | || ||| | ||||| || | || ||| | || ||| | | | | Sbjct 18350 GCAATGATTCTGTTCTTCATGTTGTCGGACCAGAGACCAAGGTCAACCAAATCCTTCAAG 18291 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 || ||||| || | ||| ||||| |||| ||| || | ||| | ||| || || Sbjct 18290 AGCCAGGGATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGAC 18231 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || ||||| || | |||| ||||| ||||| ||||||| || || ||||| |||||| Sbjct 18230 GTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATA 18171 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288 || || || | | | || | | ||||||| | || | | |||| | | | Sbjct 18170 GGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATCC 18111 Query 77289 CAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA 77348 |||||||| ||||||||||| ||||| ||| | ||| || || || || || || | Sbjct 18110 CAATCCCATAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACC-TTGTGA 18052 Query 77349 GCATATGAT-CCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGC 77407 | | | || | ||| || ||||| || |||| | | || ||||| || ||| Sbjct 18051 GACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGC 17992 Query 77408 TTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAAT 77467 || ||| | | || || ||||||||||| | | ||||| | | || || Sbjct 17991 AGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGG 17932 Query 77468 ACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACC 77527 | || || ||| | | ||| || ||||||||||| | |||||||| |||| ||| Sbjct 17931 AGAGTCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACC 17872 Query 77528 AATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTC 77587 || ||||| |||| ||| | | ||||| || | ||| || || || || || Sbjct 17871 AACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATC 17812 Query 77588 TATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC 77647 || || || || | |||| | || |||| || || | || ||| || Sbjct 17811 GATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGTC 17752 Query 77648 AAAT---CTTCCATCT--AT-AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAAC 77701 | || | || || || || || | | ||| | ||| || ||||| || || Sbjct 17751 ATATTCACCTCGGGCTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGAC 17692 Query 77702 TGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTACATTT 77758 || | ||||| | |||| || | | || || || || ||||| | Sbjct 17691 AGCGATCTCAT---CTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCG 17635 Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| || ||||| || | ||||||||||| || ||||| | ||||| ||||| ||| | Sbjct 17634 GATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATA 17575 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGAC-TCT-AGCTTTT 77876 ||||||||||| || |||||| ||| | || | | || || || ||| || || Sbjct 17574 AGGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACC--ACAACTTCTGGGCCTTG 17517 Query 77877 ATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCT 77936 | | | ||| | |||| | ||||| || ||| || || ||||| || Sbjct 17516 ACCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCG 17457 Query 77937 CCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCT 77996 || | |||||| | | || || |||| || || | || | |||||| | Sbjct 17456 CCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTC 17397 Query 77997 TCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 78056 | || || ||| |||| || ||||| || |||| || ||| ||| | || |||| Sbjct 17396 TTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCG 17337 Query 78057 CTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGC 78116 | | ||||| ||||| |||||| | || | || | || | | ||| | ||| Sbjct 17336 CGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGC 17277 Query 78117 CATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATAT 78176 ||||| || ||||| || || | | || || || ||||| || ||||| || | ||| Sbjct 17276 CATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAA 17217 Query 78177 CTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTT 78236 | ||| ||||| || | || | | ||| ||||| | ||| || || || || || || Sbjct 17216 CGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTC 17157 Query 78237 CCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCC 78296 || | |||||| ||| | || ||||| | | | | || || || || || Sbjct 17156 CCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGCCAGCA 17097 Query 78297 ATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 |||| || || | ||| ||| || | || ||||| || ||||| || ||||| || Sbjct 17096 GTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCT 17037 Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416 |||||| | | || || |||| |||| | || ||| || ||||| || | Sbjct 17036 TTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGA 16977 Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476 || ||||| || || || || || || | || | || ||||| || || || || Sbjct 16976 GTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTC 16917 Query 78477 TCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCA 78536 || ||||| | ||| || || || || |||||||| | ||| || || ||||| || Sbjct 16916 TCGATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCG 16857 Query 78537 ACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAG 78596 || | || || || | || |||||| |||||||||| || || || || || Sbjct 16856 GCCACTTGTTTGCCAATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTAT 16797 Query 78597 TTGTATGAAAAGTCTCTCTCGTAAA 78621 | ||| ||||||| ||||||| Sbjct 16796 TGGTAGTTGAAGTCTCGGTCGTAAA 16772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694655992044000