Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq883 120 7e-22
seq1350 95.1 3e-14
seq256 86.0 1e-11
>seq883
Length=160511
Score = 120 bits (132), Expect = 7e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|| |||||| ||||| ||||| ||||| || |||||||| || ||| | ||||| ||
Sbjct 38131 TCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACC 38072
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||||| ||| || |||||||| | | || ||||||| || |||||||||||
Sbjct 38071 GTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTT 38012
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||| ||| | || | ||||||| || ||||| || || ||
Sbjct 38011 GTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGAT 37952
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | ||||| || |||| |||||
Sbjct 37951 GGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916
Score = 96.9 bits (106), Expect = 8e-15
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || |||||||| || ||||||||||||||||| || | ||| | || |||
Sbjct 37899 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCT 37840
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| || || || | || ||||| | | || |||||||| ||
Sbjct 37839 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCC 37780
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAG 152070
|| || || || ||| | || | | | | ||| | ||| || |||||||| || |
Sbjct 37779 TGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGA--CTCGACCTCAAGAGTGATGG 37722
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || |||||||| ||||||| |||||
Sbjct 37721 TCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
>seq1350
Length=234104
Score = 95.1 bits (104), Expect = 3e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
||||||||||||||||| | |||| ||||| || || || |||||||||||
Sbjct 96580 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 96521
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | ||| ||||||| | ||| |||||||| ||||| || || ||||| | ||
Sbjct 96520 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 96461
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | || || ||| || ||||| || || || ||||||||||| ||||| ||||||
Sbjct 96460 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 96401
>seq256
Length=205955
Score = 86.0 bits (94), Expect = 1e-11
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
|||||||||| |||||| | || | | |||| ||| ||| || || ||||| ||||
Sbjct 110630 CTTGAATTTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATAG 110571
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| ||||||||||| ||||||||||||| |||||| ||
Sbjct 110570 TCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGTT 110534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153798994589725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |