Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq883 172 1e-37
seq1350 138 2e-27
seq738 122 2e-22
seq256 105 1e-17
seq1449 91.5 3e-13
seq377 89.7 1e-12
>seq883
Length=160511
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| ||||| || | || ||||||||||||||||||||||
Sbjct 37915 ACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACT 37856
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| || || ||||| || |||||||| || | |||||||||||| ||
Sbjct 37855 GAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGG 37796
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| |||||||| |||||||| | || || | ||||| || || | |||||
Sbjct 37795 AATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGAC 37736
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || || | |||||| ||||| || |||||
Sbjct 37735 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || | | |||| ||| | ||||| || || || || ||||||||||
Sbjct 38371 ACCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGA 38312
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || | ||| || || ||||||||||| || ||||| || ||
Sbjct 38311 AAGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGG 38252
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||| || || |||||||||| || ||| | || ||||||||||||| ||| ||
Sbjct 38251 AATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAAC 38192
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || ||||| || ||||| ||||| || || ||||||||
Sbjct 38191 TTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||| || || || ||||| | || || || |||||||| |||||
Sbjct 38142 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 38083
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || || |||| |||||| || || |||||||| ||||||||||| ||||
Sbjct 38082 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 38023
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||||||||| ||||| | |||||| | ||||| ||||| || | ||| |||
Sbjct 38022 ATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACT 37963
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || ||||| ||||| || || || |||||
Sbjct 37962 TCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916
Score = 150 bits (166), Expect = 4e-31
Identities = 159/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| |||||||| |||| ||| || || |||||| || |||||||| |||
Sbjct 37687 ACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACT 37628
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| |||||||||||||| || ||||| ||||| || || | ||||||||| ||| |
Sbjct 37627 CAAG-GTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAG 37569
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||| || |||||||| || ||||| | ||||| | ||||| || || | ||||
Sbjct 37568 GAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGA 37509
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077
| ||||| ||||| ||||| || ||||
Sbjct 37508 CCTCGAGGGTGATGGTCTTGCCGGTCA 37482
>seq1350
Length=234104
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|||||||||||||| ||| || || ||||||||||| ||||| || ||||| ||||||
Sbjct 96580 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 96521
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || |||||||| || || || ||||| ||||||||||| | || ||| | |||
Sbjct 96520 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 96461
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || || || | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 96460 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 96402
>seq738
Length=55810
Score = 122 bits (134), Expect = 2e-22
Identities = 257/371 (69%), Gaps = 12/371 (3%)
Strand=Plus/Plus
Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAA-ACA 274489
||||| || |||||||||| | || ||| |||||||| ||||||||||| || |
Sbjct 20269 ACGATCGGGGTGATAAATTCCACCAAGAACTTTGGAATTTGGAGCAGACTGGGAAATTGA 20328
Query 274490 ACTATGGAAAAAGTTCAT-GACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTG 274548
||| || || || || || ||||| ||| |||||| |||| ||| || |||||
Sbjct 20329 ACT-TGCAAGAAATTAATCAACAAG-CCTTTAATGTGACTTCCATCATGATCCTGATCTG 20386
Query 274549 TCATGATCATAACATGTCCATACCGAAG--CGAGGAAGTATCTTTATACAACTTCCCTGT 274606
|||||||||| | |||||||| ||||| || || ||||| | || |||| | |||
Sbjct 20387 TCATGATCATCAAGTGTCCATAGCGAAGGCCGTGG--GTATCGGTGTA-GACTTTCTTGT 20443
Query 274607 -TTGAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCC 274664
|| || || || | | |||| | | | || || ||||||||| ||| |
Sbjct 20444 GCTGGAGACCGAGGAAGTTTTTGATGTTCTG-AATCTCGGCGTTCTTTGAGATCTGATCA 20502
Query 274665 ACAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCG 274724
|| || || || || || |||| | |||||||| || || || |||||| || |||
Sbjct 20503 ACTGATGCGTCTCGGACATTCAAAAGTTTACCGCGCAGGGGAAAGACGCCAAACAAATCG 20562
Query 274725 CGCCCGATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGA 274784
| || | |||||| | ||||| || || ||| | |||||||||||||| || ||
Sbjct 20563 GGACCAACGACCGATCGTCCGGCCATTGCAAGACCTTTGGCTGAATCTCCCTCAGTCAGT 20622
Query 274785 ATCAAAGTACA 274795
||||| || ||
Sbjct 20623 ATCAAGGTGCA 20633
>seq256
Length=205955
Score = 105 bits (116), Expect = 1e-17
Identities = 108/140 (77%), Gaps = 1/140 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || |||||||| || ||||| || ||||| || || || ||||||||||| |
Sbjct 110822 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 110763
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| || ||||| || ||||| ||||||| ||||| |||||| ||
Sbjct 110762 AGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 110703
Query 282993 ATACCCTCCTTGTCT-TGGA 283011
|| || ||||||||| ||||
Sbjct 110702 ATGCCTTCCTTGTCTGTGGA 110683
>seq1449
Length=96978
Score = 91.5 bits (100), Expect = 3e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 315664 ACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCC 315723
|| || ||||| | || | ||| || |||| | || || || || || |||||
Sbjct 58900 ACTACACCACCCTCAAACTCCTTGAGAGCCTTGGACAGAGCGCCCAGCGAGTCCCGGTCA 58959
Query 315724 ACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGCG-GCGCC 315782
| |||||||||| ||||| |||||||| | ||| || |||||||| | || || |
Sbjct 58960 AGGTAGTTGGTCGGTTCATCGAGAACGATCAAGTGAGGACGTTGCCAT-GTGCAAGCAGC 59018
Query 315783 GATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAGTGGTAAA 315842
|| ||||| ||| | |||||||||||||| ||||| |||||||| |||| | | |
Sbjct 59019 GAGAACGACCTTGACACGCTGCCCACCAGACAGACCACGCATGCGAGAGTGAGAGATGAG 59078
Query 315843 TTCTGGGTCAAGGCCAACATTAGC 315866
||| | ||| || || | ||| ||
Sbjct 59079 TTCCGCGTCGAGACCGAAATTGGC 59102
>seq377
Length=202478
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288
|||||||| || | || ||| |||||||| || ||||| || || ||| || || |
Sbjct 91123 GGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTT 91182
Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348
|| || || || |||| || || || |||| || ||| |||||||| |||
Sbjct 91183 GCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATC 91242
Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408
||| | ||| || || ||||||||||| ||||||||| | ||||| || | | |||||
Sbjct 91243 TCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAGACCGGT 91302
Query 230409 GT 230410
||
Sbjct 91303 GT 91304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046719418264650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |