Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq883 172 1e-37 seq1350 138 2e-27 seq738 122 2e-22 seq256 105 1e-17 seq1449 91.5 3e-13 seq377 89.7 1e-12 >seq883 Length=160511 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| ||||| || | || |||||||||||||||||||||| Sbjct 37915 ACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACT 37856 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| || || ||||| || |||||||| || | |||||||||||| || Sbjct 37855 GAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGG 37796 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| |||||||| |||||||| | || || | ||||| || || | ||||| Sbjct 37795 AATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGAC 37736 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||| ||||| || ||||| Sbjct 37735 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | | |||| ||| | ||||| || || || || |||||||||| Sbjct 38371 ACCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGA 38312 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || | ||| || || ||||||||||| || ||||| || || Sbjct 38311 AAGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGG 38252 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| || || |||||||||| || ||| | || ||||||||||||| ||| || Sbjct 38251 AATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAAC 38192 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || ||||| ||||| || || |||||||| Sbjct 38191 TTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||| || || || ||||| | || || || |||||||| ||||| Sbjct 38142 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 38083 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || |||| |||||| || || |||||||| ||||||||||| |||| Sbjct 38082 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 38023 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||| ||||| | |||||| | ||||| ||||| || | ||| ||| Sbjct 38022 ATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACT 37963 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || ||||| ||||| || || || ||||| Sbjct 37962 TCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916 Score = 150 bits (166), Expect = 4e-31 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| |||||||| |||| ||| || || |||||| || |||||||| ||| Sbjct 37687 ACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACT 37628 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||||||||| || ||||| ||||| || || | ||||||||| ||| | Sbjct 37627 CAAG-GTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAG 37569 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || |||||||| || ||||| | ||||| | ||||| || || | |||| Sbjct 37568 GAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGA 37509 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | ||||| ||||| ||||| || |||| Sbjct 37508 CCTCGAGGGTGATGGTCTTGCCGGTCA 37482 >seq1350 Length=234104 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||||||||| ||| || || ||||||||||| ||||| || ||||| |||||| Sbjct 96580 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 96521 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || |||||||| || || || ||||| ||||||||||| | || ||| | ||| Sbjct 96520 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 96461 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || || || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 96460 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 96402 >seq738 Length=55810 Score = 122 bits (134), Expect = 2e-22 Identities = 257/371 (69%), Gaps = 12/371 (3%) Strand=Plus/Plus Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAA-ACA 274489 ||||| || |||||||||| | || ||| |||||||| ||||||||||| || | Sbjct 20269 ACGATCGGGGTGATAAATTCCACCAAGAACTTTGGAATTTGGAGCAGACTGGGAAATTGA 20328 Query 274490 ACTATGGAAAAAGTTCAT-GACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTG 274548 ||| || || || || || ||||| ||| |||||| |||| ||| || ||||| Sbjct 20329 ACT-TGCAAGAAATTAATCAACAAG-CCTTTAATGTGACTTCCATCATGATCCTGATCTG 20386 Query 274549 TCATGATCATAACATGTCCATACCGAAG--CGAGGAAGTATCTTTATACAACTTCCCTGT 274606 |||||||||| | |||||||| ||||| || || ||||| | || |||| | ||| Sbjct 20387 TCATGATCATCAAGTGTCCATAGCGAAGGCCGTGG--GTATCGGTGTA-GACTTTCTTGT 20443 Query 274607 -TTGAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCC 274664 || || || || | | |||| | | | || || ||||||||| ||| | Sbjct 20444 GCTGGAGACCGAGGAAGTTTTTGATGTTCTG-AATCTCGGCGTTCTTTGAGATCTGATCA 20502 Query 274665 ACAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCG 274724 || || || || || || |||| | |||||||| || || || |||||| || ||| Sbjct 20503 ACTGATGCGTCTCGGACATTCAAAAGTTTACCGCGCAGGGGAAAGACGCCAAACAAATCG 20562 Query 274725 CGCCCGATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGA 274784 | || | |||||| | ||||| || || ||| | |||||||||||||| || || Sbjct 20563 GGACCAACGACCGATCGTCCGGCCATTGCAAGACCTTTGGCTGAATCTCCCTCAGTCAGT 20622 Query 274785 ATCAAAGTACA 274795 ||||| || || Sbjct 20623 ATCAAGGTGCA 20633 >seq256 Length=205955 Score = 105 bits (116), Expect = 1e-17 Identities = 108/140 (77%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||||||| || ||||| || ||||| || || || ||||||||||| | Sbjct 110822 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 110763 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || ||||| || ||||| ||||||| ||||| |||||| || Sbjct 110762 AGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 110703 Query 282993 ATACCCTCCTTGTCT-TGGA 283011 || || ||||||||| |||| Sbjct 110702 ATGCCTTCCTTGTCTGTGGA 110683 >seq1449 Length=96978 Score = 91.5 bits (100), Expect = 3e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 315664 ACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCC 315723 || || ||||| | || | ||| || |||| | || || || || || ||||| Sbjct 58900 ACTACACCACCCTCAAACTCCTTGAGAGCCTTGGACAGAGCGCCCAGCGAGTCCCGGTCA 58959 Query 315724 ACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGCG-GCGCC 315782 | |||||||||| ||||| |||||||| | ||| || |||||||| | || || | Sbjct 58960 AGGTAGTTGGTCGGTTCATCGAGAACGATCAAGTGAGGACGTTGCCAT-GTGCAAGCAGC 59018 Query 315783 GATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAGTGGTAAA 315842 || ||||| ||| | |||||||||||||| ||||| |||||||| |||| | | | Sbjct 59019 GAGAACGACCTTGACACGCTGCCCACCAGACAGACCACGCATGCGAGAGTGAGAGATGAG 59078 Query 315843 TTCTGGGTCAAGGCCAACATTAGC 315866 ||| | ||| || || | ||| || Sbjct 59079 TTCCGCGTCGAGACCGAAATTGGC 59102 >seq377 Length=202478 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288 |||||||| || | || ||| |||||||| || ||||| || || ||| || || | Sbjct 91123 GGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTT 91182 Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348 || || || || |||| || || || |||| || ||| |||||||| ||| Sbjct 91183 GCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATC 91242 Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408 ||| | ||| || || ||||||||||| ||||||||| | ||||| || | | ||||| Sbjct 91243 TCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAGACCGGT 91302 Query 230409 GT 230410 || Sbjct 91303 GT 91304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046719418264650