Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq883 129 1e-24 seq1350 111 4e-19 seq256 96.9 8e-15 >seq883 Length=160511 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || || ||||| || ||||| || | || Sbjct 37691 CAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGAT 37750 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| || ||||| ||||| ||| Sbjct 37751 ACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAACAA 37810 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||| || || |||||||| || | ||||| || || ||| || Sbjct 37811 CGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAACATC 37870 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || || || Sbjct 37871 CAAAAAGAATCGACTCTTCACCTGGT 37896 Score = 122 bits (134), Expect = 2e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||||||||| || | || |||||||| || || || Sbjct 37484 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 37543 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| ||||| || ||||| || || ||||| || || |||||||| ||| Sbjct 37544 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 37603 Query 178065 CAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 |||||||| ||||| | || |||| ||||| ||| | || |||||||| || |||| Sbjct 37604 CAGCTCGAGGATGGCCGCAC-CTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCA 37662 Query 178124 T 178124 | Sbjct 37663 T 37663 >seq1350 Length=234104 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||| ||||| || || || || ||| Sbjct 96402 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACAATC 96461 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| || || || ||||| ||||| |||||||| || || | Sbjct 96462 GACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGCATCCCCCCGGACCAACAGCGCTTG 96521 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || || || || ||||| | || || ||||| ||| ||||||| Sbjct 96522 ATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACACTGAGTGATTACAACATCCAAAA 96580 >seq256 Length=205955 Score = 96.9 bits (106), Expect = 8e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| |||||||| ||||||||||| || ||||||||||| || || || ||| Sbjct 110689 GACAAGGAAGGCATCCCTCCTGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTTGAA 110748 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | ||||| |||| || ||| | || || || ||||| |||| || || Sbjct 110749 GATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCAACGTTGCACCTGGT 110804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203708451361150