Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq883 122 8e-23
seq256 102 8e-17
seq1350 82.4 7e-11
>seq883
Length=160511
Score = 122 bits (134), Expect = 8e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| |||||| ||||||||||||||||| || ||||| || || ||||| | ||
Sbjct 38355 AACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATCT 38296
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| | |||||||| || || |||| |||||||| |||| |||| | ||| || |||
Sbjct 38295 TCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATCC 38236
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| ||| ||| ||| | | | |||||| || || || |||| ||| || ||
Sbjct 38235 TGGATCTTTGACTT-GACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGT 38177
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || |||| ||||| || || |||||||||
Sbjct 38176 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || || || || || || ||||| ||||| |
Sbjct 37914 CCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTG 37855
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||| ||||||||||| || || || || |||||||| | |||
Sbjct 37854 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGA 37795
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || |||| || | | | || ||||| ||||| ||
Sbjct 37794 ATACCTTCCTTGTCCTGGATCTTGGACTTC-ACATTGTCGATGGTATCGCTGGACTCGAC 37736
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || || || ||||| ||||| || |||||
Sbjct 37735 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||| |||||||||||| ||| || || |||| ||
Sbjct 38124 ACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCT 38065
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
| || || || ||||| |||| || |||||||||| |||| | ||||||| | ||
Sbjct 38064 AATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGT-CTTG 38006
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
| | || | || || | | | ||||| || ||||| |||| || || || ||
Sbjct 38005 AATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTT 37946
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||| ||||| || || || |||||
Sbjct 37945 GCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916
>seq256
Length=205955
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| |||| ||| ||||||||||||||| ||||||||
Sbjct 110822 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 110763
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || || |||||||||||||| |||||||| || ||||| | ||
Sbjct 110762 AGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 110703
Query 41756 ACGCTCTCCTTGTC 41769
| || ||||||||
Sbjct 110702 ATGCCTTCCTTGTC 110689
>seq1350
Length=234104
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
|||| || ||||| || || || || || | || || || |||||||||||||| |
Sbjct 96582 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 96523
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
||| |||||||||||||| ||| | || ||||| || ||| || ||| ||| |
Sbjct 96522 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTT-GACGTTG 96464
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | || ||| |||||| ||||| | || || || || ||||| || ||||| |||
Sbjct 96463 TCGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 96404
Query 41852 AA 41853
||
Sbjct 96403 AA 96402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462295476270000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |