Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq202 86.0 5e-12 >seq202 Length=612551 Score = 86.0 bits (94), Expect = 5e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTT-ATAGTATCAATCA 101984 |||||| ||| | | | ||||||| ||| || || |||||||| | ||| |||| Sbjct 343026 ATTCCAGGCAGAAAAAATTATCCTTCGATCA-TAAGGATTGTTTTTCAGTTTATGGATCA 342968 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTG 102044 || | |||||||| |||| |||| ||||||| | | || | ||||||| Sbjct 342967 CCTCCGCAAGCTGGTCAACACCTTGTCCTGTATAATCCGTCTCGGCATCGACGTATTCTG 342908 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCC 102090 | || ||||||||||||||||| || || |||||||||||||| || Sbjct 342907 CACCAAAATGCCTCCACTGAAAACCGTATACAGGTCCAAGATCACC 342862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248963403508