Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq96 96.9 7e-15 >seq96 Length=177703 Score = 96.9 bits (106), Expect = 7e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 ||||||||| | || || |||| ||||| || |||||||| || || |||||||| || Sbjct 128580 CTTCCTCATCTCCTCCTCTACGGGCCTCCTGGTACAGGCAAAACCTCCACCATCCTCGCC 128521 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||||||| | | ||| ||||||| | | || ||||| || || ||| Sbjct 128520 CTCGCCCGAAAAATCTACGGCTCCAAGAACATGCGCCAAATGGTTCTCGAACTCAATGCT 128461 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC 254171 |||||||| || || | ||||| || ||||| |||||||||| ||| || Sbjct 128460 TCTGACGACCGTGGCATCGACGTTGTGCGCGAACAGATCAAGACGTTCGCC 128410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073759411122944