Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq172 107 1e-18 >seq172 Length=386049 Score = 107 bits (118), Expect = 1e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | |||||||| |||||||| || || | || || || ||||| || | ||| Sbjct 25336 CGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCATTCGCCTCTATA 25277 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||| ||||||| ||| || |||||||| | | || ||||||||| | || | Sbjct 25276 TTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTCC 25217 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 |||||||||||||| ||| |||||||| || Sbjct 25216 CGTGACGAAGGTCTCCACACCGACTTTGCCTG 25185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231394468724