Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq487 107 3e-18
>seq487
Length=114140
Score = 107 bits (118), Expect = 3e-18
Identities = 193/279 (69%), Gaps = 5/279 (2%)
Strand=Plus/Minus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| || |||||||||| ||| || || | ||||| || ||||||||||| || || |||
Sbjct 17360 GTGAATTGAATGGGAGCGGAAGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTCAGA 17301
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCTAGGATCGGCTAT 70919
|| | |||| || || ||||||||||| | ||| |||| | ||||| ||
Sbjct 17300 CCCAACTTCCAGCCAGCGAAGTGCATACTCGTGATCTTGCCCATAG-TTGGATCCTTCAT 17242
Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979
||| || |||||||| || || ||||||||||| || | || |||||||| | |
Sbjct 17241 GTGGATGTTCATCGATTGGGACTGGTCGATGAAGGCACCACGATCAGCAGCCATCTGAAC 17182
Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039
||| || || | || ||||| | ||| || |||| ||| ||||| | ||||
Sbjct 17181 GATGGTACGCTGGGAGATCTCCCAGACAGTCTTGTAAAGAGCCTTGATATCGGCAGGAAT 17122
Query 71040 GTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075
||| | ||| || ||||| || ||||| || || ||
Sbjct 17121 GTTAGGGACATTTTGGATGGAACCTCCATCGGCGATGAT 17083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671134938266080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |