Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq487 351 3e-91
seq202 86.0 2e-11
>seq487
Length=114140
Score = 351 bits (388), Expect = 3e-91
Identities = 1171/1797 (65%), Gaps = 47/1797 (3%)
Strand=Plus/Plus
Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATT 363444
||| ||| |||| ||||| | |||| ||| ||||| |||| || || | || | |||
Sbjct 15537 ATACTTT-GGATTCAAGACTCTTGAGAGATCATACCT-TCTCCGTCTCGAGGGCAAGATT 15594
Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504
| ||||| || || || ||| | ||| | || ||| | ||||| || | ||| ||
Sbjct 15595 GCCGAACGTCCACAACACATGATCATGAGAGTGGCTGTGGGTATTCACGGGGATGATATT 15654
Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGC 363562
|| || || || ||||| || || | || | | ||| || || ||||| | |
Sbjct 15655 GAGAGTGCTATCGAGACATACAA--TTTGATGTCCAGCAAGTACTTTACACACGCGTCTC 15712
Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622
|||| | | || || || | | |||| | ||||| ||||| | | | |
Sbjct 15713 CAACCCTCTTTGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGACA 15772
Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682
||||||| || ||||| ||||| | || || || |||| |||||| | || ||||
Sbjct 15773 TGAAGGAGGACAGTATCGACGGTATTTACGATACTCTCAAGACTTGTGCCATGATCTCCA 15832
Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG-TTACATT 363741
||||||| || || || ||| | |||||| | ||||| || || |||||||
Sbjct 15833 AGAATGCTGGAGGCATCGGTCTGAATGTCCACAGAATCCGTGC-CACTGGAGCTTACATT 15891
Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801
|||||| || |||| || || | ||||| ||||| || || || |||| ||
Sbjct 15892 GCTGGCACAAACGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACA 15951
Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861
|| || || || |||||||||||| |||||| || || || || || || ||||||
Sbjct 15952 GCCAGATATGTTGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAG 16011
Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAA 363921
|| || || ||| | |||||||| ||||| ||||| || ||| ||||| ||||||
Sbjct 16012 CCATGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAA 16071
Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981
| || || || ||||| ||||| || || ||| || | || | || |||||||| ||
Sbjct 16072 GTTCGCGCTCGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTGTT 16131
Query 363982 GAGGCAGGTAAGAAT------TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035
||| |||||| ||| |||| | ||||| |||| || || |||||| |
Sbjct 16132 GAG------AAGAATGGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCT 16185
Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095
||||| | |||||||| | || ||||| ||||| ||||| || | || || |||| |
Sbjct 16186 GATGTTTACGGTGACGAATTTGAGGCTCTTTACGAGAAGTACGAGGCAGAAGGCAAGGGT 16245
Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155
|| ||||| || || |||||||| |||| ||||| | || |||| | |||||
Sbjct 16246 CGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACC 16305
Query 364156 GGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214
|||| ||||| | ||| | ||||| ||| | |||||||| ||| || ||| || ||||
Sbjct 16306 GGAA-ACCCTTTCATGCTCTACAAGGATGCTTGCAACCGTAAGAGTAATCAGAAGAACCT 16364
Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273
|||||| | || |||| ||| || || || ||||| |||||||| || || ||||
Sbjct 16365 TGGTACCA-TCCGCAGCTCCAATCTCTGCACAGAGATCGTTGAATACTGTGCACCTGACG 16423
Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATG 364327
|| || || |||||| | || || | || || || | | || ||| ||||
Sbjct 16424 AGGTCGCTGTTTGTAACTTGGCTTCTCTTGCTCTCCCAACTTACGTCAACCAAAATGATG 16483
Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT-ACTTGCA-ATCTCG- 364384
| | | ||| ||| | ||| | || || || || | | | || | | || |
Sbjct 16484 GCAGCTACGACTTTCAGAAGCTTCACGATGT---CTGCCAGGTTGTCGTGAAGAACTTGA 16540
Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGT 364443
||||| | ||||||| || || || || |||| || || || | | ||| | |||
Sbjct 16541 ACAAGATCATCGACATCAACTACTACCCTGTTCCCGAGGCACGCAAGAGC-AATTTCCGT 16599
Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATG 364503
|| | || |||| | ||||||| ||||| ||||| || || || | || |
Sbjct 16600 CACAGACCTATTGCTGTTGGTGTCCAGGGTCTCGCCGATGTYTTCCTAGCTCTTCGTCTC 16659
Query 364504 GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTT 364563
|||| || || || || || || || | ||||||| || || || ||
Sbjct 16660 CCATTCGAGTCTCCCGAGGCCAAACACCTCAACATCCAGATCTTCGAGACCATCTACCAC 16719
Query 364564 GCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAG 364623
|| || ||||| | || ||| | ||||| | || | ||| || || ||
Sbjct 16720 GCTGCCTTGACTTCATCTGTTGAGCTTGCAAAGCAGCATGGTACTTACGAGACATACGAA 16779
Query 364624 GGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTC 364683
|| ||||| ||| || ||| | |||| | ||| | ||||| || || || | |
Sbjct 16780 GGTTCCCCAGCTTCACAAGGAGAGCTCCAATACGATATGTGGAAGGTTACACCTACCGAT 16839
Query 364684 CGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC---TC 364739
| ||| |||||| || | | | ||| | ||| |||| ||| ||| ||| |
Sbjct 16840 CTTTGGGACTGGGCCACCTTGAAGCAACAA-ATCAAGCAGCACGGTCTTCGTAACAGTTT 16898
Query 364740 CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTG 364799
|||||| || || ||||| || || ||| || ||||| || |||||||||
Sbjct 16899 GCTCGTT---GCTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGTG 16955
Query 364800 CTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGT 364859
||||| || | ||| |||| | || || || || || || | || ||||| | ||
Sbjct 16956 TTTCGAGCCATACACATCCAATATCTACTCCCGACGTGTCCTGGCTGGTGAATTCCAAGT 17015
Query 364860 AGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAA 364919
||||| | | | ||||||||| ||| || || ||| || | ||||||
Sbjct 17016 CGTTAACCCTTGGTTGTTGAAGGATCTTGTCGATATGGGTCTCTGGTCAGATAACATGAA 17075
Query 364920 GAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCT 364979
|||| ||||||||||| | ||||| | || || | || |||| | ||| |
Sbjct 17076 GAACCGTATCATCGCCGATGGAGGTTCCATCCAAAATGTCCCTAACATTCCTGCCGATAT 17135
Query 364980 GAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGC 365039
||| || ||||||| || || ||||| || ||| ||| || || || | ||||| ||
Sbjct 17136 CAAGGCTCTTTACAAGACTGTCTGGGAGATCTCCCAGCGTACCATCGTTCAGATGGCTGC 17195
Query 365040 CGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAAC 365099
||||| ||||| || ||| ||| ||| ||| | ||| | ||||| | |||||
Sbjct 17196 TGATCGTGGTGCCTTCATCGACCAGTCCCAATCGATGAACATCCACATGAAGGATCCAAC 17255
Query 365100 CTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| | || ||||| ||| || ||||| | ||||| ||||| ||
Sbjct 17256 TATGGGCAAGATCACGAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAGACCGG 17312
>seq202
Length=612551
Score = 86.0 bits (94), Expect = 2e-11
Identities = 93/121 (77%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCG-ACAA 111481
|| || |||||||| || ||||| || || | ||| ||||| || || |||||| ||
Sbjct 342796 AAGATCTGGGATGGCAACGGATCGCGCGAATATCTCGATTCGGTCGGG-TTGTCGCACCG 342854
Query 111482 CGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA 111541
|| || |||||||| ||||| || ||||| ||||| ||| | || ||||||||||| ||
Sbjct 342855 CGCAGTCGGTGATCTTGGACCTGTATACGGTTTTCAGTGGAGGCATTTTGGTGCAGAATA 342914
Query 111542 C 111542
|
Sbjct 342915 C 342915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303345116797256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |