Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq344 86.0 5e-12 >seq344 Length=396322 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||| |||| ||| || || |||||||| || |||||||||||| | Sbjct 109872 CCTCCACGAAGACGCAGCACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 109931 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | |||||||| || || || ||| ||||||| | ||| ||||| || Sbjct 109932 AAAGTGCGGCCATCCTCCAACTGCTTACCAGCAAAAATAAGTCTCTGCTGGTCGGGTGGG 109991 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| || || || | ||| || | | | | ||||| | ||| | Sbjct 109992 ATACCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACT 110051 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || ||||| |||| || ||||| || |||||||| Sbjct 110052 TCCAGAGTAATAGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 110098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085491998920