Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq344 95.1 1e-14
>seq344
Length=396322
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| | ||| | ||||| || || || ||||| |||||
Sbjct 110097 ATACCACCACGAAGGCGAAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAATCA 110156
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||| ||| || | || || |||||| | ||||| | ||| ||||| ||
Sbjct 110157 GACAAGGTACGGCCATCCTCCAACTGCTTTCCAGCGAAAATGAGTCTCTGCTGGTCGGGT 110216
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| || | | |||| || || | ||||||
Sbjct 110217 GGGATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCG 110276
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || ||||||||||| || || |||||||||||
Sbjct 110277 ACCTCGAGTGTGATTGTCTTTCCGGTCAGAGTCTTGACGAAAATCTGCAT 110326
Score = 86.0 bits (94), Expect = 5e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || | | || | ||| | |||||||| || || |||||||||||
Sbjct 110617 ATACCGCCACGAAGACGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCC 110676
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| ||| || || || || || |||||| |||| | |||||| ||||| ||
Sbjct 110677 GAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGG 110736
Query 114273 GGAATGCCTTCTTTGTC 114289
|||||||| || |||||
Sbjct 110737 GGAATGCCCTCCTTGTC 110753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420131798842896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |