Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq202 93.3 4e-14 >seq202 Length=612551 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| ||||| || || ||||| | || ||| || ||||| ||| | | | Sbjct 343070 AACATGTGGCAGGGAGGTAGGGCCATGAGTTTCATATCCTTAGGATTCCAGGCAGAAAAA 343011 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 || || |||| ||| | ||||| ||||| | | || | | | || | |||||| Sbjct 343010 ATTATCCTTCGATCATAAGGATTGTTTTTCAGTTTATGGATCACCTCCGCAAGCTGGTCA 342951 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | || || |||||||| || | || || || ||||| | || ||||| ||||||||| Sbjct 342950 ACACCTTGTCCTGTATAATCCGTCTCGGCATCGACGTATTCTGCACCAAAATGCCTCCAC 342891 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCC 20580 || |||||||| |||||||| | ||| || Sbjct 342890 TGAAAACCGTATACAGGTCCAAGATCACC 342862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441369997282720