Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq172 89.7 1e-12 >seq172 Length=386049 Score = 89.7 bits (98), Expect = 1e-12 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 243505 ATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTT 243564 || || || || ||||| | ||| | || ||| | || ||| |||| || ||| Sbjct 25129 ATTACCGAGGCTGTTGAGATCGAGCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTT 25070 Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 | ||||||||| ||| | ||| || ||||| || ||||| || || || | || Sbjct 25069 CTCGGCATGAACGCTGCTTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTC 25010 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 |||| || ||| | ||||| ||||| ||| ||||| || | ||| |||||| | Sbjct 25009 CTCGCTCTCGGTAACGAGAAGTATTACAAGTCCGCCAACCCATTCGACTTCATGGAGAAC 24950 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCT 243744 || || ||| || || || ||||||||||| ||||||||| || || ||| || Sbjct 24949 ATCTCCCTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTACCAAAAAGCT 24890 Query 243745 GGTGTGATG 243753 ||||| ||| Sbjct 24889 GGTGTTATG 24881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872821629800