Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq487 269 3e-67
seq172 150 2e-31
>seq487
Length=114140
Score = 269 bits (298), Expect = 3e-67
Identities = 1120/1747 (64%), Gaps = 49/1747 (3%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|||||||||||||| || ||||| || ||| ||||||| || | ||||| |
Sbjct 17327 CGGAGGTAGTACATGCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTG 17268
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | |||||| | |||| || |||||| |||||| || |||||||||
Sbjct 17267 ATCTTGCCCATAGTTGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAG 17208
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773
|||||||| || ||||| | || | | | | || | || ||||| |||||
Sbjct 17207 GCACCACGATCAGCAGCCATCTGAACGA--TGGTACG-CTGGGAGATCTCCCAGACAGTC 17151
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| ||||| | || || | || |||||||||||| || || |
Sbjct 17150 TTGTAAAGAGCCTTGATATCGGCAGGAATGTTAGGGACATTTTGGATGGAACCTCCATCG 17091
Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893
|| || | | |||||| | | |||||||||||| || | ||||||| ||
Sbjct 17090 GCGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTCAAC 17031
Query 113894 AG---ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950
| | | ||| || || || ||||| || ||| |||| |||||||||
Sbjct 17030 AACCAAGGGTTA---ACGACTTGGAATTCACCAGCCAGGACACGTCGGGAGTAGATATTG 16974
Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010
| ||||||||||| || ||||| ||| || | |||||| ||| ||| || |||
Sbjct 16973 GATGTGTATGGCTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGC 16914
Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070
|| || || | ||| | |||||||| ||||| | | | | || ||| ||| | || |
Sbjct 16913 ATAGGAGCAACGAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTG 16854
Query 114071 TCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 114128
||||||| | || | | || | || | ||||||||| | ||||| ||||
Sbjct 16853 GCCCAGTCCCAAA-GATCGGTAGGTGTAACCTT-CCACATATCGTATTGGAGCTCTCCTT 16796
Query 114129 GGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG-AG 114187
| || ||||| || || || |||||||||| | || | || || | || ||
Sbjct 16795 GTGAAGCTGGGGAACCTTCGTATGTCTCGTAAGTACCATGCTGCTTTGCAAGCTCAACAG 16736
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247
| || ||| | ||||| || || ||||| || || | || | ||||||
Sbjct 16735 ATGAAGTCAAGG-CAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGGTGTTTGGCC 16677
Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATA--AATACATCCGCGAGACCTTGGACAC 114305
||| || || || | ||| || | | || || ||||| |||||||| |||||||
Sbjct 16676 TCGGGAGACTCGAATGGGAGACG--AAGAGCTAGGAARACATCGGCGAGACCCTGGACAC 16619
Query 114306 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAA 114362
| | |||| || | || | | ||| ||| || || ||| || || ||
Sbjct 16618 CAACAGCAATAGGTCTGTGACGGAAATTGCTCTTGCGTGC---CTCGGGAACAGGGTAGT 16562
Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422
| || | ||||| | | | || | || || |||||||| || || |||||||
Sbjct 16561 AGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACATCGTGAAGCT 16502
Query 114423 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482
| | | || | |||| | | || ||||| || | || || || | || ||||
Sbjct 16501 TCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCA 16442
Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542
||||| |||| | ||| || || ||| || | || || || || | ||| |
Sbjct 16441 AGTTACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACGATCTCTGTGCAGAGATTGG 16382
Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 114602
| || ||||| || | |||||| ||||| ||| ||| || ||||||||||| |
Sbjct 16381 AGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCTTACGGTTGCAAGCATCCTTGTAGA 16322
Query 114603 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCG 114661
||||| | || | || ||||| ||||| | || ||| || | | ||| | | || | |
Sbjct 16321 GCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTCTGGG 16262
Query 114662 GCTGGCACAGTGGCGTTGGCTCGCCCCT--CCT----CCTCGTACTTTGTGTAGAGGGCT 114715
|| | ||| ||| || |||| ||| |||||||||| ||| || ||
Sbjct 16261 CCTTGA----TGGTCTTG---CGACCCTTGCCTTCTGCCTCGTACTTCTCGTAAAGAGCC 16209
Query 114716 TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGAC 114775
||||| || ||||| | || | || || || || | ||||| | || | |
Sbjct 16208 TCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTGTC 16149
Query 114776 CATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG 114835
||| |||| || ||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct 16148 CATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGAAG 16089
Query 114836 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 114895
||||| ||| |||| |||| || | || || || || | || | || || | |
Sbjct 16088 AGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAG 16029
Query 114896 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCC 114952
| ||| |||||||| || || ||||| | ||||| | || || | ||| ||
Sbjct 16028 ACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCCACCC 15969
Query 114953 TGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGAT 115012
|||| ||||| || |||||| || || || || ||||| |||| ||||| | ||
Sbjct 15968 TGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAG 15909
Query 115013 TGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCA 115072
| || ||||| || ||| || | |||| | || |||| | || |||
Sbjct 15908 TTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCG 15849
Query 115073 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCG 115132
|| || || || ||| ||||| || || | ||||| | |||| || ||||||
Sbjct 15848 ATGCCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCGTAAATACCGTCG 15789
Query 115133 ATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 115192
|| ||| |||| | |||| | |||||| || | ||||| |||||| ||
Sbjct 15788 ATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTTGTGGTGTGCCG 15729
Query 115193 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGG 115250
||| ||||||||||| | |||||| || | | |||| ||||||| || ||| |
Sbjct 15728 GCGGCAAAGAGGGTTGGAGACGCGTG--TGTAAAGTACTTGCTGGACATCAAATTGTATG 15671
Query 115251 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 115310
|||| | | ||| || |||||||||||||| | | || | ||| | |||||
Sbjct 15670 TCTCGATAGCACTCTCAATATCATCCCCGTGAATACCCACAGCCACTCTCATGATCATGT 15611
Query 115311 ATTGGGG 115317
||| ||
Sbjct 15610 GTTGTGG 15604
>seq172
Length=386049
Score = 150 bits (166), Expect = 2e-31
Identities = 306/450 (68%), Gaps = 6/450 (1%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| | || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 24899 GTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGGGAGATGTTCTCCAT 24958
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875
|| || |||||||| || || || || | | ||| | | ||| |||
Sbjct 24959 GAAGTCGAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAG--GAGCAGA 25016
Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935
||||| | |||| |||||||||| | |||| ||| |||||| |||| || |
Sbjct 25017 CGATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCA 25076
Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995
|| || || || || | |||| | | ||| || || || || || | | | |
Sbjct 25077 CAGGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCGGTAATAACGTCT 25136
Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGA-GTTCCACGGCAAACTC 126054
|| | | | | | || | || | ||| ||| | | || |||||| ||
Sbjct 25137 TGGACTGCTTGCTTGCTTGGACGATGGTTCAAGTGGGAGAACAAGAGGCA-GGCAAAGTC 25195
Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114
||||||||| ||||||||||||||||| || || |||||| || |||||||| ||
Sbjct 25196 GGTGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCAG 25255
Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174
||| ||||||||||||||||| || | |||||||| ||||||||||| ||||| ||
Sbjct 25256 ACCACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCAAC 25315
Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAA 126204
| || || |||| |||||||| ||| ||
Sbjct 25316 AGCGGCAAAGGCAACGAGACGCTGAGCGAA 25345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349806804640
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