Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq117 102 3e-16 >seq117 Length=215807 Score = 102 bits (112), Expect = 3e-16 Identities = 187/274 (68%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 |||| || || || || ||||| ||| | ||||| || || ||||| ||||| || || | Sbjct 53532 TTACCGTCCCAGCATACTTCAACGATTCGCAACGTCAGGCTACTAAGGATGCTGGTCAAA 53473 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 |||| ||| | || ||||| || | | || || || || || || ||||| || |||| Sbjct 53472 TTGCAGGTCTTAACGTTCTCCGTGTAGTCAACGAGCCAACCGCTGCCGCTCTTGCTTATG 53413 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | | | | ||| | ||||| || | |||| || | |||| ||||||||| Sbjct 53412 GGTTGG-------AGAAGGAT--GAAGACAAGATTATTGCTGTCTATGATCTTGGTGGAG 53362 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 |||| ||||| || || ||| || | | || ||||| || || ||| | |||| Sbjct 53361 GAACCTTTGATATCTCCGTTCTTGAGATCCAGAAGGGTGTATTCGAGGTCAAGTCCACCA 53302 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | ||||| || || |||| || || ||| |||| Sbjct 53301 ACGGTGACACCCACTTAGGTGGAGAGGATTTTGA 53268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975705540542864