Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq117 102 3e-16
>seq117
Length=215807
Score = 102 bits (112), Expect = 3e-16
Identities = 187/274 (68%), Gaps = 9/274 (3%)
Strand=Plus/Minus
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
|||| || || || || ||||| ||| | ||||| || || ||||| ||||| || || |
Sbjct 53532 TTACCGTCCCAGCATACTTCAACGATTCGCAACGTCAGGCTACTAAGGATGCTGGTCAAA 53473
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
|||| ||| | || ||||| || | | || || || || || || ||||| || ||||
Sbjct 53472 TTGCAGGTCTTAACGTTCTCCGTGTAGTCAACGAGCCAACCGCTGCCGCTCTTGCTTATG 53413
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| | | | ||| | ||||| || | |||| || | |||| |||||||||
Sbjct 53412 GGTTGG-------AGAAGGAT--GAAGACAAGATTATTGCTGTCTATGATCTTGGTGGAG 53362
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
|||| ||||| || || ||| || | | || ||||| || || ||| | ||||
Sbjct 53361 GAACCTTTGATATCTCCGTTCTTGAGATCCAGAAGGGTGTATTCGAGGTCAAGTCCACCA 53302
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602
| ||||| || || |||| || || ||| ||||
Sbjct 53301 ACGGTGACACCCACTTAGGTGGAGAGGATTTTGA 53268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975705540542864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |