Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq185 228 1e-54
seq98 134 2e-26
>seq185
Length=385050
Score = 228 bits (252), Expect = 1e-54
Identities = 501/745 (67%), Gaps = 8/745 (1%)
Strand=Plus/Minus
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463
||||||| || || ||||||||||| |||||| || || | ||||| |
Sbjct 61669 CTTTCTTGTGCTTGCGTTTAAACTCACTTACGAAGTGGTTAACAAGACGATTGTCGAAGT 61610
Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523
| |||||||||||||| || || || ||||| | ||||| ||||||||||| | || |
Sbjct 61609 CCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACCTCAAAGATACCCTCCTCGA 61550
Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583
| | || | || ||||| || || || ||||| || || || ||||| || || |
Sbjct 61549 TAGTCAAGAGAGAGACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGGACATTACGCT 61490
Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643
| | || ||||| || |||||||| || || || || || ||||| || || || |
Sbjct 61489 CACCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTTGGCTCGTTGATGA 61430
Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703
| || ||| || || || || || | ||||| || || ||||| || || || |
Sbjct 61429 TTCGGAGAACATTGAGACCGGCGATCAGACCGGCATCCTTTGTAGCTTGACGCTGGGAGT 61370
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC-TTTCTTACCGAGATACGAT 7762
| | ||||| || || || || ||||| |||| |||| ||| | ||||| || |
Sbjct 61369 CAGTGAAGTAAGCTGGTACAGTAACGACGGCGTTGTTGACGGTTCCT-CCGAGGTAAGCC 61311
Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822
|| || | ||| |||| ||| | | ||| || || ||||| |||| | || ||
Sbjct 61310 TCAGCAGTCTCTCTCATCTTGACCAAGATCATGGAAGAGATCTCCTCAGGTGTGAATTGC 61251
Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882
||| | || || || || ||||| || | | || || || || ||| | | |||
Sbjct 61250 TTCTTCTCGCCCTTGAACTCAACCTCGACGACTGGCTT-TC--CACCACGGTCAAGAACA 61194
Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942
| | | | | |||||||| | ||||||| || | |||| | ||| ||
Sbjct 61193 GTGAAGGGGAAGTGCTTCATATCAGCCTGGACCTCAGCATCTGCGTACTTGCGTCCAATC 61134
Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002
|||||||| ||||| || || ||||| | ||||||||||| ||||||||| || ||
Sbjct 61133 AGACGCTTGGCATCGAAGACAGTGTTGATTGGGTTCATGGCAACTTGGTTCTTGGCAGCA 61074
Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062
|| ||||| | ||| ||| || || || || |||||| | || || || || || ||
Sbjct 61073 TCTCCGATCAAACGCTCAGTA---TCTGTGAAGGCGACGAAGGAAGGTGTTGTGCGGTTT 61017
Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122
|| |||||||| ||||||||||| | || || | | ||| || ||||| || ||
Sbjct 61016 CCCTGGTCGTTTGCAATAATTTCGATACGATCATCTCTGAAGATACCCACGCAAGAGTAG 60957
Query 8123 GTTGTTCCTAAATCAATACCGATTG 8147
|| || || | ||| || || ||||
Sbjct 60956 GTGGTACCCAGATCGATTCCTATTG 60932
>seq98
Length=652022
Score = 134 bits (148), Expect = 2e-26
Identities = 246/358 (69%), Gaps = 13/358 (4%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||||||||| || |||||||| || || || ||||| | || || || | |||
Sbjct 362202 TCGAAATCTTCTCCTCCCAAGTGGGTGTCACCAGCGGTTGAGAGAACCTCGAAAACACCA 362261
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAGT 7573
| |||||| || | |||||||| || || || ||||| || || | ||||| |
Sbjct 362262 CGATCAATGGACAAGAGGGAAACATCGAAGGTTCCTCCACCGAGATCGTAGACAATGATT 362321
Query 7574 --ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631
||| || || | | | |||| || || ||||| |||||||| || || || |
Sbjct 362322 TGACGCTC---TC-----CCTCGGTCTTGTCAAGTCCGTATGCGATAGCTGCGGCGGTAG 362373
Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691
|||| || | |||||||| ||||| || || ||| | ||||| || || ||||
Sbjct 362374 GTTCGTTGACGATACGAAGGACGTTCAAACCGGCGATAACACCGGCATCCTTGGTAGCTT 362433
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751
||| || ||||| ||||| || ||||| || || || || | || || || | |
Sbjct 362434 GTCTCTGGTTGTCGTTGAAGTATGCGGGGACGGTAACAACGGCATGGGTAACCTTGTGTC 362493
Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|||| || ||||| |||| ||| ||||| || ||||| ||| | ||| ||||||||
Sbjct 362494 CGAGGTATGATTCGGCGACATCCTTCATCTTTCCAAGAATCATGGCTGAGATCTCTTC 362551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635128766906720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |