Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq487 331 1e-85
seq172 156 5e-33
>seq487
Length=114140
Score = 331 bits (366), Expect = 1e-85
Identities = 929/1399 (66%), Gaps = 43/1399 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
||||| ||||| ||||| | || || | ||||| || ||||| |||||||| || |
Sbjct 15604 CCACAACACATGATCATGAGAGTGGCTGTGGGTATTCACGGGGATGATATTGAGAGTGCT 15663
Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||||||| | ||||||| | ||| || | ||||| | |||||||||||
Sbjct 15664 ATCGAGACATACAATTTGATGTCCAGCAAGTACTTT-ACACACGCGTCTCCAACCCTCTT 15722
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| || |||||| | | ||| | || || ||| | || | | ||||||||
Sbjct 15723 TGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGACATGAAGGAGGA 15782
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
||| | || ||||||| ||||||| |||||| ||||| ||| |||||
Sbjct 15783 CAGTATCGACGGTATTTACGATACTCTCAAGACTTGTGCCATGATCTCCAAGAATGCTGG 15842
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910
|| ||||| || | |||| || | |||| || ||| || |||||
Sbjct 15843 AGGCATCGGTCTGAATGTCCACAGAATCCGTGCCACTGGAGCTTACATTGCTGGCACAAA 15902
Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970
|| | || | |||||| |||| ||||| || || || ||| |||||| | |||||
Sbjct 15903 CGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACAGCCAGATATGT 15962
Query 111971 AAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 112027
|||| | ||| | ||| || || |||| |||| || ||||||||||||||
Sbjct 15963 TGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAGCCATGGCACGC 16022
Query 112028 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGC 112085
||| || | ||||||||||| | || ||||| || | ||||| | |||| |
Sbjct 16023 TGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAAGTTCGCGCT-- 16080
Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145
||||||||||||| |||||| |||||||||||||||||||||||| | |||||| ||| |
Sbjct 16081 CGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTGTTGAGAAGAAT 16140
Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205
|| | ||| | || | || || || || |||||||| | |||| |||||
Sbjct 16141 GGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCTGATGTTTACGGTGAC 16200
Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGC 112263
|| ||||| || || ||| |||||||||| || ||| | | | | || ||| | |
Sbjct 16201 GAATTTGAGGCTCTTTACGAGAAGTACGAGGCAG-AAGGCAAGGGTC-GCAAGACCAT-C 16257
Query 112264 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322
|| | || | | ||| | | || ||| || | ||||||||||| || | || |
Sbjct 16258 AAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACCGGAAACCCTTTC 16317
Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382
||||| ||||| || || || |||| ||||||||||| ||||| | ||| |||
Sbjct 16318 ATGCTCTACAAGGATGCTTGCAACCGTAAGAGTAATCAGAAGAACCTTGGTACCATCCGC 16377
Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACGGCTGTGT 112440
|| ||||| ||||| ||||| ||| | ||| ||| | || || ||| ||||| |
Sbjct 16378 AGCTCCAATCTCTGCACAGAGATCGTTGAA--TACTGTGCACCTGACGAGGTCGCTGTTT 16435
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGA 112498
||||| | || || | |||||||| | || || | ||| | | | | || | ||
Sbjct 16436 GTAACTTGGCTTCTCTTGCTCTCCCAACTTACGT-CAACCA-AAATGATGGCAGCTACGA 16493
Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558
| | | || || ||||| || | |||| || ||| | |||| | || ||
Sbjct 16494 CTTTCAGAAGCTTCACGATGTCTGCCAGGTTGTCGTGAAGAACTTGAACAAGATCATCGA 16553
Query 112559 TAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615
| || | ||||| ||| ||| || || || ||| | | ||| | || ||
Sbjct 16554 CATCAACTACTACCCTGTTCCCGAG---GCACGCAAGAGCAATTTCCGTCACAGACCTAT 16610
Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGA 112672
|| | | |||||||| |||||||| ||||| ||| | |||| ||| || |||| ||
Sbjct 16611 TGCTGTTGGTGTCCAGGGTCTCGCCGATGTYTTCCTAGCTCTTCGTCTCC---CATTCGA 16667
Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
|| ||| || || | |||| | || || ||||| || || ||||| || ||
Sbjct 16668 GTCTCCCGAGGCCAAACACCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGC-CT 16726
Query 112733 TGAGGCGA---GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
||| | ||| ||| | ||| || ||||| | || || || | || |||||
Sbjct 16727 TGACTTCATCTGTT--GAGCTTGCAAAGCAGCATGGTACTTACGAGACATACGAAGGTTC 16784
Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACT 112848
|||||||||||||| | ||| |||| ||||||| ||||||| | ||| | | || |
Sbjct 16785 CCCAGCTTCACAAGGAGAGCTCCAATACGATATGT-GGAAGGTTACACCTACCGATCTTT 16843
Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908
||||||| | | | ||| ||| |||||| || | ||||||||||||||| | |
Sbjct 16844 GGGACTGGGCCACCTTGAAGCAACAAATCAAGCAGCACGGTCTTCGTAACAGTTTGCTCG 16903
Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968
| || || |||||||| ||| ||| |||||| | || || || || || || |
Sbjct 16904 TTGCTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGTGTTTCGAGC 16963
Query 112969 CCTACACGACGAACATCTA 112987
| ||||| | || |||||
Sbjct 16964 CATACACATCCAATATCTA 16982
>seq172
Length=386049
Score = 156 bits (172), Expect = 5e-33
Identities = 311/456 (68%), Gaps = 20/456 (4%)
Strand=Plus/Minus
Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233
|| ||| |||| ||| | || ||||| ||||||||||||||||||||| ||||| |||
Sbjct 25345 TTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCATTC 25286
Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293
| |||| | ||| | |||||||| ||||| ||||||||||| |||||||||||||
Sbjct 25285 GCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAACGAG 25226
Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTT-TTCAAATTATT 102352
|| ||||| |||||||| || |||||| || ||||| || ||| ||| |
Sbjct 25225 CTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGC-CTGCCTCTTGTTC-------T 25174
Query 102353 GCGTATTAAACCAACGACTGAG--ACTATTCATTCTA-----TTGTTAAGGAAGCCGTTG 102405
| || ||||| || | || | | || || | || ||| || || ||||
Sbjct 25173 CCCACTTGAACCATCGTCCAAGCAAGCAAGCAGTCCAAGACGTTATTACCGAGGCTGTTG 25114
Query 102406 AGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTG 102465
|||| ||| | | ||| | ||||| ||||| || ||||| |||| ||||| |||
Sbjct 25113 AGATCGAGCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCTG 25054
Query 102466 AAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGC 102525
|||| |||| ||||||| || ||||| | || | | || |||
Sbjct 25053 CTTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCT--CCTCGCTCTCGGTAA 24996
Query 102526 CTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGG 102583
| || || || ||| || ||||| ||||||||||||||||| ||| | |||
Sbjct 24995 CGAGAAGTATTACAAGTCCGCCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCCGG 24936
Query 102584 GAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619
||||| ||||||||||| ||| | || | |||||
Sbjct 24935 AAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTA 24900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738458285760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |