Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq330 104 3e-17 >seq330 Length=485723 Score = 104 bits (114), Expect = 3e-17 Identities = 346/524 (66%), Gaps = 37/524 (7%) Strand=Plus/Plus Query 159276 TATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGC 159335 |||||| || |||||| || | || || ||||| ||| | || | ||||| |||| | | Sbjct 105669 TATCACTGGATTTGATGCTGTGTCCTTGCAACCCAACTCTGGTGCCCAGGGCGAGTTTAC 105728 Query 159336 AGGACT----GTTA---GCAA--TCCAAGCATACCATCAAGGATCAGGAGATGATAAAAG 159386 ||||| |||| |||| |||||| | | || | ||| || || | | Sbjct 105729 TGGACTTCGTGTTATCCGCAAGTTCCAAGAACAGCAACCAGG--CAAGA-------AGCG 105779 Query 159387 AAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGC 159446 || | || ||||| |||| || ||||| |||||||| || ||||| || | ||||| Sbjct 105780 CGATATCTGCTTGATTCCAGTCTCCGCACACGGAACTAACCCAGCATCTGCCGCCATGGC 105839 Query 159447 AGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGAT-GGCAACATAGACATCAAAGA 159503 || ||| ||| ||| |||||||||| | || || || | || || | || Sbjct 105840 TGGAATGCGAGTCGTAACCATCAAGTGTGACACCAAGACCGGAAATCTCGATATGGAGGA 105899 Query 159504 TCTAGAGAAG--AAAGCAATCATGAATACATTT--GAACT--GT-CATGTATTATGATTA 159556 ||| |||| |||| | |||||| ||||| || || || ||||| | Sbjct 105900 TCT---GAAGGCAAAGTGCG-AGAAATACAGCGAAGAACTCGGTGCA---ATCATGATCA 105952 Query 159557 CATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA-CAGATATGTAAGATTGTT 159615 | ||||| |||| ||||| ||||| | | ||| | | | | ||| | |||| Sbjct 105953 CCTATCCCAGTACATTCGGTGTCTTTGAGCCCGAAGTCAAAGCCGCT-TGTGACCTTGTC 106011 Query 159616 CATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTA 159675 ||| || ||||||| || ||||| | ||||| || || | ||||| ||| | ||||| Sbjct 106012 CATCAGCATGGTGGGCAAGTATACATGGATGGCGCCAACATGAATGCTCAGATTGGTCTC 106071 Query 159676 GCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGT 159735 || | || || || || || || ||| | ||| |||| |||||||||||| Sbjct 106072 TGTTCGCCCGGCGAGATCGGAGCTGACGTCTGCCATTTGAACCTACACAAGACATTCTGT 106131 Query 159736 ATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| || || ||||| ||||| || || || || |||||||| Sbjct 106132 ATTCCTCACGGTGGTGGTGGTCCAGGTGTTGGACCAATTGGTGT 106175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047465874880