Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq487 298 7e-76
seq172 145 9e-30
>seq487
Length=114140
Score = 298 bits (330), Expect = 7e-76
Identities = 1167/1808 (65%), Gaps = 39/1808 (2%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
|||||||| |||| || ||||||| || | || |||| || ||||| |||| |
Sbjct 15538 TACTTTGGATTCAAGACTCTTGAGA-GATCATACCTTCTCCGTCTCGAGGGCAAGATTGC 15596
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| ||||| ||||| ||||| | || || | || || |||||||| || |||||
Sbjct 15597 CGAACGTCCACAACACATGATCATGAGAGTGGCTGTGGGTATTCACGGGGATGATATTGA 15656
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
|| | ||||||||| | ||||||| |||| | | || ||||| | |||
Sbjct 15657 GAGTGCTATCGAGACATACAATTTGATGTCCAGCAAGTACTTTACA--CACGCGTCTCCA 15714
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
|||||||| || || |||||| | | || | || |||||| | |||| ||
Sbjct 15715 ACCCTCTTTGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGACATG 15774
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||||||| ||| ||||||| || | ||||| | | ||||| ||||| |||
Sbjct 15775 AAGGAGGACAGTATCGACGGTATTTACGATACTCTCAAGACTTGTGCCATGATCTCCAAG 15834
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502
||||| || || || || | |||| | | |||| | | || |||
Sbjct 15835 AATGCTGGAGGCATCGGTCTGAATGTCCACAGAATCCGTGCCACTGGAGCTTACATTGCT 15894
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| ||||| || | || | |||||| |||| ||||| || || || ||| ||||||
Sbjct 15895 GGCACAAACGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACAGCC 15954
Query 75563 CGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619
| ||||| | || | || | ||| || | ||||| ||||| | || |||
Sbjct 15955 AGATATGTTGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAGCCA 16014
Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679
||||| || ||| || | ||||||||||| | ||| ||||| || | || || | |
Sbjct 16015 TGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAAGTT 16074
Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
|| | | |||||||| | | || ||||||||||| || ||||||||||| ||||||
Sbjct 16075 CGCGCTCGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTGTTGAG 16134
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
|| |||| |||| | || | || || || || || ||||| | || |
Sbjct 16135 AAGAATGGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCTGATGTTTAC 16194
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAG-AGGAGGGTAGAG--CCAATGCG 75856
||||| || ||||| || || ||| ||||| || | || ||| || | ||| |
Sbjct 16195 GGTGACGAATTTGAGGCTCTTTACGAGAAGTACGAGGCAGAAGGCAAGGGTCGCAA---G 16251
Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
|| | | || | | || | ||||| | | || ||| | | || || ||||| ||||
Sbjct 16252 ACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACCGGAAA 16310
Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975
|| | ||||| |||||||||||||| ||| |||||||| || ||||| | || ||
Sbjct 16311 CCCTTTCATGCTCTACAAGGATGCTTGCAACCGTAAGAGTAATCAGAAGAACCTTGGTAC 16370
Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
||| ||||| ||||| ||||| || || | || ||| | || ||| ||
Sbjct 16371 CATCCGCAGCTCCAATCTCTGCACAGAGATCGTTGAATACTGTGCACCTGACGAGGTCGC 16430
Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTT 76095
|||||| || ||||| || | || || |||| || ||||| || | | ||| |
Sbjct 16431 TGTTTGTAACTTGGCTTCTCTTGCTCTCCCAACTTACGTCAACCAAAATGATGGCAGCTA 16490
Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155
|| | | | || ||||| || || || |||| || || | ||| ||||
Sbjct 16491 CGACTTTCAGAAGCTTCACGATGTCTGCCAGGTTGTCGTGAAGAACTTGAACAAGATCAT 16550
Query 76156 TGACAGAAATTTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212
|||| || | || || ||| ||| || || ||| ||| | || ||||||||
Sbjct 16551 CGACATCAACTACTACCCTGTTCCCGAG---GCACGCAAGAGCAATTTCCGTCACAGACC 16607
Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTG 76271
||||| | | ||||| || |||||||| ||||| || | | | | || | |||| |
Sbjct 16608 TATTGCTGTTGGTGTCCAGGGTCTCGCCGATGTYTTCCTAGCTCTTCGTCT-CCCATTCG 16666
Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331
| || || ||||| | | || | ||||| || ||||| || ||||| | ||
Sbjct 16667 AGTCTCCCGAGGCCAAACACCTCAACATCCAGATCTTCGAGACCATCTACCACGC-TGCC 16725
Query 76332 TGGAGGCGAGTTG-TGAATTGGCTGAAGC-CCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
| || | || ||| | || |||| || ||| | || ||||||| || |||||
Sbjct 16726 TTGACTTCATCTGTTGAGCTTGC-AAAGCAGCATGGTACTTACGAGACATACGAAGGTTC 16784
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAAC 76447
|| || || ||||| | ||| || | ||||||| ||||||| | ||| | | ||
Sbjct 16785 CCCAGCTTCACAAGGAGAGCTCCAATACGATATGT-GGAAGGTTACACCTACCGATC-TT 16842
Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507
| ||||||| | ||| ||| |||||| || | ||||||||||||||| | |
Sbjct 16843 TGGGACTGGGCCACCTTGAAGCAACAAATCAAGCAGCACGGTCTTCGTAACAGTTTGCTC 16902
Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567
| || || |||||||| ||| ||| |||||| | || || || || || ||
Sbjct 16903 GTTGCTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGTGTTTCGAG 16962
Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627
||||||||| | || |||||| || | ||| || ||||| || | || |||
Sbjct 16963 CCATACACATCCAATATCTACTCCCGACGTGTCCTGGCTGGTGAATTCCAAGTCGTTAAC 17022
Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 76687
| | || || || | || ||||||||||| | | |||||| | |
Sbjct 17023 CCTTGGTTGTTGAAGGATCTTGTCGATATGGGTCTCTGGTCAGATAACATGAAGAACCGT 17082
Query 76688 ATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
|| | | || |||||||| |||||| || | | || || | ||||||||| |
Sbjct 17083 ATCATCGCCGATGGAGGTTCCATCCAAAATGTCCCTAACATTCCTGCCGATATCAAGGCT 17142
Query 76748 CTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804
|| ||| || || ||||| || | || | | | || || | ||||| || |||
Sbjct 17143 CTTTACAAGACTGTCTGGGAGATCTCCCAG-CGTACCA--TCGTTCAGATGGCTGCTGAT 17199
Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATG 76864
|||||| |||||| || || ||| ||||| | |||| | |||||| |||
Sbjct 17200 CGTGGTGCCTTCATCGACCAGTCCCAATCGATGAACATCCACATGAAGGATCCAACTATG 17259
Query 76865 TCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTAC 76924
|||| || | |||||| | | ||||| ||| || || ||||| ||||||
Sbjct 17260 GGCAAGATCACGAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAGACCGGCATGTAC 17319
Query 76925 TATCTCCG 76932
|| |||||
Sbjct 17320 TACCTCCG 17327
>seq172
Length=386049
Score = 145 bits (160), Expect = 9e-30
Identities = 304/448 (68%), Gaps = 4/448 (1%)
Strand=Plus/Minus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
||||| |||| || |||| ||||| ||| |||||||||||||||||||| ||||||
Sbjct 25345 TTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCATTC 25286
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| |||| | |||||||||||||| ||||| |||||||| || |||||| || ||
Sbjct 25285 GCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAACGAG 25226
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGC-TCTTCAAGACTTT 65249
|| || ||||| || || ||||||||| || |||||| || | | ||| ||
Sbjct 25225 CTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGCC-TGCCTCTTGTTCTCCCACTT 25167
Query 65250 GCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGA 65309
| || | || | | || | |||| | | | | | ||||| |||||||| ||
Sbjct 25166 GAACCATCGTCCAAGCAAGCAAGCAGTCCAAGACGTTATTACCGAGGCTGTTGAGATCGA 25107
Query 65310 GAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGAT 65369
| ||| |||| | || || || || ||| ||| |||| |||||| ||| |||
Sbjct 25106 GCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCTGCTTTGAT 25047
Query 65370 GTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCAT 65429
| | |||||||||| || | |||||||| ||| | | || | | |
Sbjct 25046 GAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTC-CTCGCTCTCGGTAACGAGAAGT 24988
Query 65430 -TTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCA 65488
|| || | || ||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct 24987 ATTACAAGTCCGCCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCCGGAAAGACCA 24928
Query 65489 ACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||||| |||||||| || | |||||
Sbjct 24927 ACTTCTTCGAGAAGCGTGTCGCCGACTA 24900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565811783040
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