Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq344 86.0 1e-11 >seq344 Length=396322 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||||||| | |||| ||| || || || |||||| || || | | Sbjct 109884 CGCAGCACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCA 109943 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || || || |||||||| | |||||| || || || || || || || ||| Sbjct 109944 TCCTCCAACTGCTTACCAGCAAAAATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTA 110003 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| || | || || || || || ||||||||||| ||||| ||| Sbjct 110004 TCCTGGATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATA 110063 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || | || || || || || ||||| Sbjct 110064 GTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 110098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648687194560