Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq172 84.2 5e-11
>seq172
Length=386049
Score = 84.2 bits (92), Expect = 5e-11
Identities = 152/221 (69%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 131786 TTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCT 131845
|| |||||| | || ||||| || || ||||| | | |||||| |||||| | | ||
Sbjct 25407 TTCCCTGCA-TCAAGAAGAAGGCCGACTGGGCCGTAAGATGGATCCAAGATAAGGACTCT 25349
Query 131846 AATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCT 131905
| || || | || || || ||||| |||||| ||||| ||||| || ||| |
Sbjct 25348 ACATTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCA 25289
Query 131906 TTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAAT 131965
||| |||| || ||| | ||||||||||| ||||||| || || | || |||||
Sbjct 25288 TTCGCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAAC 25229
Query 131966 CAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
| ||||||| | || |||| | || || || |||||
Sbjct 25228 GAGCTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGC 25188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186805075332188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |