Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10- 26] 508 sequences; 52,477,121 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq172 84.2 5e-11 >seq172 Length=386049 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 131786 TTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCT 131845 || |||||| | || ||||| || || ||||| | | |||||| |||||| | | || Sbjct 25407 TTCCCTGCA-TCAAGAAGAAGGCCGACTGGGCCGTAAGATGGATCCAAGATAAGGACTCT 25349 Query 131846 AATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCT 131905 | || || | || || || ||||| |||||| ||||| ||||| || ||| | Sbjct 25348 ACATTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCA 25289 Query 131906 TTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAAT 131965 ||| |||| || ||| | ||||||||||| ||||||| || || | || ||||| Sbjct 25288 TTCGCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAAC 25229 Query 131966 CAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 | ||||||| | || |||| | || || || ||||| Sbjct 25228 GAGCTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGC 25188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186805075332188