Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq172 86.0 9e-11
>seq172
Length=386049
Score = 86.0 bits (94), Expect = 9e-11
Identities = 138/192 (72%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTTGCCGA 1456180
||| |||||||||||||| | | |||||| |||| | || ||| ||| || || |
Sbjct 25394 GAAGAAGGCCGACTGGGCCGTAAGATGGATC--CAAGATAAGGACTCTACA-TTCGCTCA 25338
Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239
||| ||||| | ||||||||| || ||||| ||||| ||||| || ||| | | ||
Sbjct 25337 GCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCATTCGCCTCTAT 25278
Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCA 1456299
|| ||| | |||||||| || || ||||| |||||| ||| |||||| | |||
Sbjct 25277 ATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTT-ACCTTCTCCAACGAGCTCATCT 25219
Query 1456300 GTCGCGACGAAG 1456311
|| |||||||
Sbjct 25218 CCCGTGACGAAG 25207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177762202466296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |