Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq487 230 3e-55
seq172 154 2e-32
>seq487
Length=114140
Score = 230 bits (254), Expect = 3e-55
Identities = 1111/1745 (64%), Gaps = 45/1745 (3%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|||||||||||||| || ||||| || ||| ||||||| || | ||||| |
Sbjct 17327 CGGAGGTAGTACATGCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTG 17268
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| |||| | |||||| | |||| || |||||| |||||| || |||||||||
Sbjct 17267 ATCTTGCCCATAGTTGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAG 17208
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013
|| ||||| || ||||| | || | | | | || | || ||||| ||||||
Sbjct 17207 GCACCACGATCAGCAGCCATCTGAACGA--TGGTACG-CTGGGAGATCTCCCAGACAGTC 17151
Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073
|||| || ||| ||||| | || || | || |||||||||||| || || |
Sbjct 17150 TTGTAAAGAGCCTTGATATCGGCAGGAATGTTAGGGACATTTTGGATGGAACCTCCATCG 17091
Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133
|| || | | |||||| | | |||||||||||| || | ||||||| ||
Sbjct 17090 GCGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTCAAC 17031
Query 118134 AG---ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190
| | | ||| || || || ||||| || ||| |||| |||||||||
Sbjct 17030 AACCAAGGGTTA---ACGACTTGGAATTCACCAGCCAGGACACGTCGGGAGTAGATATTG 16974
Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250
| ||||||||||| || ||||| ||| || | |||||| || ||| || |||
Sbjct 16973 GATGTGTATGGCTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGC 16914
Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310
|| || || | ||| | |||||||| ||||| | | | | || ||| ||| | | |
Sbjct 16913 ATAGGAGCAACGAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTG 16854
Query 118311 TCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 118368
||||||| | || | | || | || | ||||||||| | ||||| ||||
Sbjct 16853 GCCCAGTCCCAAA-GATCGGTAGGTGTAACCTT-CCACATATCGTATTGGAGCTCTCCTT 16796
Query 118369 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG-AG 118427
| || ||||| || || || ||||||| || | || | || || | || ||
Sbjct 16795 GTGAAGCTGGGGAACCTTCGTATGTCTCGTAAGTACCATGCTGCTTTGCAAGCTCAACAG 16736
Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487
| || ||| | ||||| || || || || || || | || | ||||||
Sbjct 16735 ATGAAGTCAAGG-CAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGGTGTTTGGCC 16677
Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATA--AATACATCCGCGAGACCTTGGACAC 118545
||| || || || | ||| || | | || || ||||| |||||||| |||||||
Sbjct 16676 TCGGGAGACTCGAATGGGAGACG--AAGAGCTAGGAARACATCGGCGAGACCCTGGACAC 16619
Query 118546 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAA 118602
| | |||| || | || | | ||| ||| || || ||| || || ||
Sbjct 16618 CAACAGCAATAGGTCTGTGACGGAAATTGCTCTTGCGTGC---CTCGGGAACAGGGTAGT 16562
Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662
| || | ||||| | | | || | || || |||||||| || || |||||||
Sbjct 16561 AGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACATCGTGAAGCT 16502
Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 118722
| | | || | |||| | | || ||||| || | || || || | || ||||
Sbjct 16501 TCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCA 16442
Query 118723 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTG 118782
||||| |||| | ||| || || ||| || | || || ||||| | || |
Sbjct 16441 AGTTACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACGATCTCTGTGCAGAGATTGG 16382
Query 118783 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 118842
| || ||||| || | |||||| ||||| ||| ||| || ||||||||||| |
Sbjct 16381 AGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCTTACGGTTGCAAGCATCCTTGTAGA 16322
Query 118843 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCA 118901
||||| | || | || ||||| ||||| | || ||| || | | ||| | | || |
Sbjct 16321 GCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTCTGGG 16262
Query 118902 GCTGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958
|| | ||| ||| | | || ||| |||||||||| ||| || || |||
Sbjct 16261 CCTTGA----TGGTCTTGCGACCCTTGCCTTCTGCCTCGTACTTCTCGTAAAGAGCCTCA 16206
Query 118959 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 119018
|| || ||||| | || | || || || || | ||||| | || | ||||
Sbjct 16205 AATTCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTGTCCAT 16146
Query 119019 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGA 119078
|||| || |||||| |||||||||||||| ||||| ||||| || || ||||||||
Sbjct 16145 GTACCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGAAGAGA 16086
Query 119079 TCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 119138
|| ||| |||| |||| || | || || || || | || | || || | || |
Sbjct 16085 TCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACA 16026
Query 119139 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGG 119195
|| |||||||| || || ||||| | ||||| | || || | ||| |||||
Sbjct 16025 TCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCCACCCTGG 15966
Query 119196 TTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGG 119255
| ||||| || || ||| ||| || || || ||||| |||| ||||| | ||| |
Sbjct 15965 TCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTC 15906
Query 119256 CCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATA 119315
|| ||||| || ||| || | |||| | || ||||| | || ||| ||
Sbjct 15905 CCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCGATG 15846
Query 119316 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 119375
|| || || ||| ||||| || || | ||||| | |||| || || |||||
Sbjct 15845 CCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCGTAAATACCGTCGATA 15786
Query 119376 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGC 119434
||| |||| | |||| | |||||| || | ||| || || ||||| || ||
Sbjct 15785 CTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTG-TGCTTGTGGTGTGCCGGC 15727
Query 119435 GTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTC 119492
| ||||| ||||| | |||||| || | | |||| ||||||| | ||| |||
Sbjct 15726 GGCAAAGAGGGTTGGAGACGCGTG--TGTAAAGTACTTGCTGGACATCAAATTGTATGTC 15669
Query 119493 TCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTAT 119552
|| | | ||| || |||||||||||||| | | || | ||| | ||||| |
Sbjct 15668 TCGATAGCACTCTCAATATCATCCCCGTGAATACCCACAGCCACTCTCATGATCATGTGT 15609
Query 119553 TGGGG 119557
|| ||
Sbjct 15608 TGTGG 15604
>seq172
Length=386049
Score = 154 bits (170), Expect = 2e-32
Identities = 306/448 (68%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| | || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 24900 TAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGGGAGATGTTCTCCATG 24959
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || |||||||| || || || | | || | | | | ||| |||||
Sbjct 24960 AAGTCGAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAG-GAGCAGACG 25018
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| |||||||||| | |||| | | |||||| |||| || |||
Sbjct 25019 ATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCACA 25078
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | |||| | | ||| || || ||||| || | | | | ||
Sbjct 25079 GGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCGGTAATAACGTCTTG 25138
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGA-GTTCCACGGCAAACTCCT 130025
| | | | ||| || | || | ||| ||| | | || |||||| ||
Sbjct 25139 GACTGCTTGCTTGCTTGGACGATGGTTCAAGTGGGAGAACAAGAGGCA-GGCAAAGTCGG 25197
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||||||||| ||||||||||||||||| || || |||||| ||||||||||| ||||
Sbjct 25198 TGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCAGAC 25257
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145
| ||||||||||||||||| || | ||||| || ||||||||||| ||||| |||
Sbjct 25258 CACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCAACAG 25317
Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAA 130173
|| || |||| |||||||| ||| ||
Sbjct 25318 CGGCAAAGGCAACGAGACGCTGAGCGAA 25345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618431272936480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |