Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq344 87.8 1e-12
>seq344
Length=396322
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | |||||| | || | ||| ||||| ||||| || ||||| ||||| ||
Sbjct 110620 CCGCCACGAAGACGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAG 110679
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || || || || || || || |||||||| ||||| || ||
Sbjct 110680 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 110739
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| |||||||||||| ||||||
Sbjct 110740 ATGCCCTCCTTGTCTTGGATCTT 110762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727651430364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |