Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq344 122 2e-22
seq116 104 5e-17
>seq344
Length=396322
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||| ||||||||||| || ||||||||||| ||| ||||| | |||||
Sbjct 109887 AGCACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCC 109946
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | || || || || ||||| ||||||||||| | | ||| || ||||| ||
Sbjct 109947 TCCAACTGCTTACCAGCAAAAATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCC 110006
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | |||| || ||| ||||| |||||||||||
Sbjct 110007 TGGATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATAGTC 110066
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | |||||| ||||||| ||||||
Sbjct 110067 TTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 110098
Score = 118 bits (130), Expect = 2e-21
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || ||||||||||| || |||||||||||||||| || || |
Sbjct 110336 GAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGATAGGGTGCG 110395
Query 151946 CCCATCTTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || | ||||| || ||||| || || ||||||||||| | | ||| ||
Sbjct 110396 GCCATCCTCCAACTGCTTT--CCAGCGAAAATGAGTCTCTGCTGGTCGGGAGGGATGCCC 110453
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||| || || |||||| | || | | | || || || ||||| |||
Sbjct 110454 TCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCGGATGATTCGACTTCGAGA 110513
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
|| || || ||||| || |||||||| ||||
Sbjct 110514 GTGATGGTCTTGCCAGTAAGAGTCTTGACGA 110544
Score = 102 bits (112), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||||||||||||||| || |||||||| ||||| | || || | |||||
Sbjct 110115 AGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAATCAGACAAGGTACGGCCATCC 110174
Query 151953 TCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| | ||||| || ||||| || || ||||||||||| | | ||| || ||||| |
Sbjct 110175 TCCAACTGCTTT--CCAGCGAAAATGAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGT 110232
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || || ||| ||||| | || | | || || || || || || || || |
Sbjct 110233 CCTGGATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCGACCTCGAGTGTGATTG 110292
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || |||||||| ||||| | ||||||
Sbjct 110293 TCTTTCCGGTCAGAGTCTTGACGAAAATCTGCAT 110326
Score = 98.7 bits (108), Expect = 2e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| |||||||||||||| || || |||||||||||||| | | ||| | || ||
Sbjct 110634 GAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTC 110693
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || |||||||| | | ||||||||| | | || || ||||| ||
Sbjct 110694 CTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 110753
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| || || |||||| | || | |||| ||| ||| || || ||||| || ||
Sbjct 110754 TTGGATCTTGCTCTTGACATTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATGGT 110813
Query 152072 TTTGCCCGT 152080
||||| ||
Sbjct 110814 CTTGCCGGT 110822
>seq116
Length=121463
Score = 104 bits (114), Expect = 5e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| ||||||||||| ||||| || ||||||||||| |||| | || |
Sbjct 20327 GAGACGGAGGACTAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACG 20386
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || ||||||||||| || | || ||||| | | || || ||
Sbjct 20387 GCCATCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGAATGCCCTC 20446
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | || ||| |||||| || || ||
Sbjct 20447 CTTGTCCTGGATCTTGGACTTGACGTTATCGATAGTATCGGAAGACTCTACCTCTAGGGT 20506
Query 152066 AATAGTTTTGCCCGTGA 152082
||| || ||||||||||
Sbjct 20507 AATTGTCTTGCCCGTGA 20523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153813290068868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |