Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq85 102 8e-17 >seq85 Length=1171154 Score = 102 bits (112), Expect = 8e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 16177 ATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCT 16236 |||||| | ||| |||| || || || |||||| || || |||||||| | | Sbjct 1031284 ATGGTTCAAGTGGGAGAACAAGAGGCAGGCAAAGTCGGTGTGGAGACCTTCGTCACGGGA 1031343 Query 16237 GATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATAT 16296 ||| || |||||||| || || | |||||||| || || ||||| ||||||||||| Sbjct 1031344 GATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCAGACCACGCTTCTTCAACCAGAATAT 1031403 Query 16297 CGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTC 16356 | || ||||| || || ||||| ||||||||||||| ||||| || | | || | Sbjct 1031404 AGAGGCGAATGAACCGGAGAAGAAGATACCCTCAACAGCGGCAAAGGCAACGAGACGCTG 1031463 Query 16357 CGCGTACGTAGCATCTTTATTACGAATCCAT 16387 ||| | |||| || |||| | |||||| Sbjct 1031464 AGCGAATGTAGAGTCCTTATCTTGGATCCAT 1031494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413351600480