Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq145 221 2e-52
seq85 109 8e-19
>seq145
Length=311005
Score = 221 bits (244), Expect = 2e-52
Identities = 1190/1880 (63%), Gaps = 39/1880 (2%)
Strand=Plus/Minus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
|||||||||||||||||||| || | | ||||| || |||||||| || || || |||
Sbjct 106476 GTGAATTGAATGGGAGCGGAAGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTCAGA 106417
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| | |||| || ||| ||||||||||| | ||| | | ||||| ||
Sbjct 106416 CCCAACTTCCAGCCAGCGAAGTGCATACTCGTGATCTTGCCCATAGTTGGATCCTTCATG 106357
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
||||| ||||| ||||| || ||||||||||| || | || |||||||| | | |
Sbjct 106356 TGGATGTTCATCGATTGGGACTGGTCGATGAAGGCACCACGATCAGCAGCCATCTGAACG 106297
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957
|| || || | || ||||| | ||| || |||| ||| ||||| | ||||
Sbjct 106296 ATGGTACGCTGGGAGATCTCCCAGACAGTCTTGTAAAGAGCCTTGATATCGGCAGGAATA 106237
Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014
|| | ||| || ||||| || ||||| || || || | ||||| || | || |
Sbjct 106236 TTAGGGACATTTTGGATGGAACCTCCATCGGCGATGATACGGTTCTTCATGTTATCTGAC 106177
Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074
|| | | ||| | | | | | | || ||||| ||||| ||||| |||
Sbjct 106176 CAGAGACCCATATCGACAAGATCCTTCAACAACCAAGGGTTAACGACTTGGAATTCACCA 106117
Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134
| ||| || | || | ||| || || || ||||| || | | || || ||
Sbjct 106116 GCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGGCTCGAAACACTCGTTGAAGCCA 106057
Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194
| |||||| || || ||||||||||| || || | ||||| || | |||||||
Sbjct 106056 AGGATTTGACTGGTACTGGCAGTTGGCATAGGAGCAACGAGCAAACTGTTACGAAGACCG 105997
Query 79195 T-ATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253
| || | |||||| | || | | |||| ||||||||||| | || ||| ||
Sbjct 105996 TGCTGCT-TGATTTGTTGCTTCAAGGTGGCCCAGTCCCAAAGATCGGTAGGTGTAACCTT 105938
Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313
||| | ||| ||||| || || | ||| || ||| |||||| || ||||
Sbjct 105937 CCACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGAACCTTCGTATGTCTCGTAAGT 105878
Query 79314 TCCTTCCTTTTCGGCTAATTC-ACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372
|| | || | || | || ||| | || || || ||| || ||||| ||||
Sbjct 105877 ACCATGCTGCTTTGCAAGCTCAACAGATGAAGTC-AAGGCAGCGTGGTAGATGGTCTCGA 105819
Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG-AATA 79431
| |||| ||||||||| || || || | || ||||| | | ||||| |
Sbjct 105818 AGATCTGGATATTGAGATGTTTGGCCTCGGGTGACTCGAATGG-GAGTCGAAGAGCTAGG 105760
Query 79432 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATT 79491
|| | || || | || || ||||||| | | |||||||| || | ||| | ||
Sbjct 105759 AAGACATCGGCGAGACCCTGGACACCAACAGCAATAGGTCTGTGACGGAAATT-GCTCTT 105701
Query 79492 TC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTAT 79550
| || || |||| ||| || || || || || || || || || | ||| | || |
Sbjct 105700 GCGTGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAC 105641
Query 79551 TACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATT------ACAAA 79604
|| | | ||||| | || || |||| || | | ||||| || || |
Sbjct 105640 AACCTGGCAGACATCGTGAAGCTTCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACGTA 105581
Query 79605 CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATT 79663
| | || | ||| |||| |||||||| || ||||| | || | | || ||||
Sbjct 105580 AGTTGGGAGAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAG-GTGCACAGTATT 105522
Query 79664 GTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCT 79723
| ||| || |||||||| || | ||||| || | || | ||||||||||
Sbjct 105521 CAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCT 105462
Query 79724 TTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTA 79783
|| ||| || |||||||| || || ||||| || | || || || | || | || |
Sbjct 105461 TTCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGA 105402
Query 79784 TAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGACTTGTATCTCTT---TTCTCTT 79839
|| | | ||| | | || | |||| | || | |||| | ||| ||||
Sbjct 105401 GGATGGAGTACCAAAGCTTCT-GGGCCT---TGATGGTCTTGCGACCCTTGCCTTCTGCC 105346
Query 79840 TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACAT 79899
||||| | ||| | || || ||||| || ||||||| | | || || ||
Sbjct 105345 TCGTACTTCTCATAGAGAGCCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCAC 105286
Query 79900 TCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCA 79959
|||| || ||||||| | ||| |||| | || || || ||||| ||||||||
Sbjct 105285 TCGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCT 105226
Query 79960 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTT 80019
|||||||| ||||| || ||||| | | | | ||||| ||||| ||||||
Sbjct 105225 GGAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTT 105166
Query 80020 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 80079
||||| |||||| | | | ||||| ||||| || || | ||| || || | | |
Sbjct 105165 CGGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCA 105106
Query 80080 CCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 80139
|| || || || ||||| ||||| || | ||||| || ||||| || |||||| | |
Sbjct 105105 CCAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGC 105046
Query 80140 ATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 80199
|| |||| |||||| ||||| | || || || || | || || |||| |||||||
Sbjct 105045 ATAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGG 104986
Query 80200 ATATT----ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 80255
|| | || ||| ||||| || || || || | || ||||| | || ||
Sbjct 104985 ATTCTGTGGAC--ATT--CAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAGT 104930
Query 80256 TTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315
|| | ||||| || || || || || || || || |||||| | | || ||
Sbjct 104929 CTTGAGAGTATCGTAAATCCCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGA 104870
Query 80316 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 80375
||| | ||| | || || || ||| | ||| ||||| ||||| ||||| |
Sbjct 104869 AGAGAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGTA 104810
Query 80376 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCC 80435
|| |||| || |||||| ||||| ||||| || ||||| ||||| ||
Sbjct 104809 CTTGCTGGACATTAAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATACC 104750
Query 80436 TACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 80495
|| || || | ||| | |||||| || || | ||| | |||||| | | |
Sbjct 104749 GACAGCCACTCTCATGATCATGTGTTGTGGACGTTCGGCAATCTTGCCCTCGAGACGGAG 104690
Query 80496 CAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 80553
| ||| ||| | || | ||| || || ||||| || | ||| ||||| || || ||
Sbjct 104689 AAGGTATGATCTCTCAAGAGTCTTGAATCCAAAGTATTGGTAGTTGAAA--TCCCGATCA 104632
Query 80554 TAAATAATAACCGAGTTGAG 80573
|| | ||| | ||||||||
Sbjct 104631 TAGACAATGGCAGAGTTGAG 104612
>seq85
Length=1171154
Score = 109 bits (120), Expect = 8e-19
Identities = 300/457 (66%), Gaps = 2/457 (0%)
Strand=Plus/Plus
Query 49653 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 49712
|| |||||| || ||||||||| || | ||||| || ||||| || || || |||||
Sbjct 1031002 AGCCATAACACCAGCTTTTTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCC 1031061
Query 49713 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 49772
| | || || || |||||||| || || || |||| || ||| | || |
Sbjct 1031062 GGCAAGAGAGATGTTCTCCATGAAGTCGAATGGGTTGGCGGACTTGTAA-TACTTCTCGT 1031120
Query 49773 TCCCAATTCAGAA-ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCAC 49831
| || | || | || | ||| ||||| || || || ||| ||||||| ||
Sbjct 1031121 TACCGAGAGCGAGGAGCAGACGATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAG 1031180
Query 49832 AATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATA 49891
||||| || | ||| | |||||||| |||| | || ||||| || || |
Sbjct 1031181 CGTTCATGCCGAGAAGAGCACAGGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAA 1031240
Query 49892 CCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA 49951
| || || || |||| | || | || | || || |||| || || |
Sbjct 1031241 CAGCCTCGGTAATAACGTCTTGGACTGCTTGCTTGCTTGGACGATGGTTCAAGTGGGAGA 1031300
Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011
||| | || || || ||| ||| ||||| ||||| | || || |||||||| |
Sbjct 1031301 ACAAGAGGCAGGCAAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGA 1031360
Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAG 50071
| || || || ||||| || |||||||| || | ||| ||||| || || ||||| || |
Sbjct 1031361 AGGTAAGACCTGGCATCAGACCACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGG 1031420
Query 50072 AAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
| |||||||| || || || |||||||||||||| ||
Sbjct 1031421 AGAAGAAGATACCCTCAACAGCGGCAAAGGCAACGAG 1031457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267327548960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |