Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq145 143 4e-29
>seq145
Length=311005
Score = 143 bits (158), Expect = 4e-29
Identities = 1111/1787 (62%), Gaps = 37/1787 (2%)
Strand=Plus/Minus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| || |||||||||| ||| || || | ||||| || ||||||||||| || || |||
Sbjct 106476 GTGAATTGAATGGGAGCGGAAGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTCAGA 106417
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCTAGGATCGGCTAT 70919
|| | |||| || || ||||||||||| | ||| |||| | ||||| ||
Sbjct 106416 CCCAACTTCCAGCCAGCGAAGTGCATACTCGTGATCTTGCCCATAG-TTGGATCCTTCAT 106358
Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979
||| || |||||||| || || ||||||||||| || | || |||||||| | |
Sbjct 106357 GTGGATGTTCATCGATTGGGACTGGTCGATGAAGGCACCACGATCAGCAGCCATCTGAAC 106298
Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039
||| || || | || ||||| | ||| || |||| ||| ||||| | ||||
Sbjct 106297 GATGGTACGCTGGGAGATCTCCCAGACAGTCTTGTAAAGAGCCTTGATATCGGCAGGAAT 106238
Query 71040 GTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096
|| | ||| || ||||| || ||||| || || || | || || || | ||
Sbjct 106237 ATTAGGGACATTTTGGATGGAACCTCCATCGGCGATGATACGGTTCTTCATGTTATCTGA 106178
Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156
||| | | ||| | | | | | | ||| ||||| ||||| ||||| ||
Sbjct 106177 CCAGAGACCCATATCGACAAGATCCTTCAACAACCAAGGGTTAACGACTTGGAATTCACC 106118
Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216
|| ||| || | || | ||| || || || || || || | |||| || ||
Sbjct 106117 AGCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGGCTCGAAACACTCGTTGAAGCC 106058
Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276
| |||||| || ||||| |||||||| || || | | ||| || | ||||||
Sbjct 106057 AAGGATTTGACTGGTACTGGCAGTTGGCATAGGAGCAACGAGCAAACTGTTACGAAGACC 105998
Query 71277 ATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNN 71335
|| || | ||||| | || | | |||| | ||||||||| | ||| |||
Sbjct 105997 GTGCTGCT-TGATTTGTTGCTTCAAGGTGGCCCAGTCCCAAAGATCGGTAGGTGTAACCT 105939
Query 71336 NNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATG 71395
|| | ||| || ||| | ||||| ||||| |
Sbjct 105938 TCCACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGAACCTTCGTATGTCTCGTAAG 105879
Query 71396 GTCCTTCTTTTTCGGCTAGTTC-ACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCG 71454
|| | | | || || || ||| | || || || | | || ||||| |||
Sbjct 105878 TACCATGCTGCTTTGCAAGCTCAACAGATGAAGTC-AAGGCAGCGTGGTAGATGGTCTCG 105820
Query 71455 AAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG-AAT 71513
|| |||| ||||||||| || || || || || ||||| | | ||||| |
Sbjct 105819 AAGATCTGGATATTGAGATGTTTGGCCTCGGGTGACTCGAATGG-GAGTCGAAGAGCTAG 105761
Query 71514 AAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAAT 71573
|| | || || | || || || |||| | | ||||||||||| | ||| | |
Sbjct 105760 GAAGACATCGGCGAGACCCTGGACACCAACAGCAATAGGTCTGTGACGGAAATT-GCTCT 105702
Query 71574 TTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTA 71632
| | || || |||| ||| || || || || || || || || || | || | || |
Sbjct 105701 TGCGTGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGA 105642
Query 71633 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTATTACAAACACGT 71692
|| | | ||||| | || || |||| || | || ||||| || ||||
Sbjct 105641 CAACCTGGCAGACATCGTGAAGCTTCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACGT 105582
Query 71693 TCAAG--------GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATA 71744
||| |||| ||| |||| |||||||| || ||||| | || | ||
Sbjct 105581 --AAGTTGGGAGAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAGGTGCACAGTA 105524
Query 71745 TTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 71804
|| | || || ||||| ||||| | |||||| || | || | ||||||||
Sbjct 105523 TTCAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACT 105464
Query 71805 CTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTC 71864
|||| ||| || |||||||| || || || || || | || || || | || | ||
Sbjct 105463 CTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTC 105404
Query 71865 TATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATATTCTTGTATCTCTT---TTCTC 71920
| || | | ||| | | || | |||| | || ||||| | ||| ||||
Sbjct 105403 GAGGATGGAGTACCAAAGCTTCT-GGGCCT---TGATGGTCTTGCGACCCTTGCCTTCTG 105348
Query 71921 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGAC 71980
||||| | ||| | || || ||||| || || ||| | | || || |
Sbjct 105347 CCTCGTACTTCTCATAGAGAGCCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGC 105288
Query 71981 ATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGAT 72040
| || || || ||||||| || ||| |||| | | || || ||||| |||||||
Sbjct 105287 ACTCGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGAT 105228
Query 72041 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 72100
| |||||||| ||||| || ||||| | | | | ||||| ||||| ||||
Sbjct 105227 CTGGAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCT 105168
Query 72101 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 72160
|| ||||| |||||| | | | ||||| ||||| || || | ||| || || | |
Sbjct 105167 TTCGGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAG 105108
Query 72161 CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 72220
| || || || || ||||| ||||| || | ||||| || ||||| || |||||| |
Sbjct 105107 CACCAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGA 105048
Query 72221 ACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 72280
||| |||| |||||| ||||| || || || || | || || |||| ||||||
Sbjct 105047 GCATAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCAC 104988
Query 72281 GAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 72340
| || || | ||||| || || || || | || ||||| | || || |
Sbjct 104987 GGATTCTGTGGACATTCAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCT 104928
Query 72341 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 72400
| | ||||| || || || || ||||| || ||| |||||| | | || || ||
Sbjct 104927 TGAGAGTATCGTAAATCCCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAG 104868
Query 72401 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 72460
| | ||| | || || || ||| | ||| ||||| ||||| ||||| | |
Sbjct 104867 AGAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGTACT 104808
Query 72461 TTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT---ATCCCATTGATGTATTC 72517
| |||| || |||||| ||||| ||||| || || ||||| ||| || |
Sbjct 104807 TGCTGGACATTAAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGA---ATAC 104751
Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
| || || || | ||| | ||| || || || | ||| | ||||||
Sbjct 104750 CGACAGCCACTCTCATGATCATGTGTTGTGGACGTTCGGCAATCTTG 104704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137824164640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |