Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq145 343 4e-89
seq116 86.0 2e-11
>seq145
Length=311005
Score = 343 bits (380), Expect = 4e-89
Identities = 1172/1798 (65%), Gaps = 49/1798 (3%)
Strand=Plus/Plus
Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATT 363444
||| ||| |||| ||||| | |||| ||| ||||| |||| || || | || | |||
Sbjct 104653 ATACTTT-GGATTCAAGACTCTTGAGAGATCATACCT-TCTCCGTCTCGAGGGCAAGATT 104710
Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504
| ||||| || || || ||| | ||| | || ||| | ||||| || | ||| ||
Sbjct 104711 GCCGAACGTCCACAACACATGATCATGAGAGTGGCTGTCGGTATTCACGGGGATGATATT 104770
Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGC 363562
|| || || || ||||| || || | || | | ||| || || ||||| | |
Sbjct 104771 GAGAGTGCTATCGAGACATACAA--TTTAATGTCCAGCAAGTACTTTACACACGCGTCTC 104828
Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622
|||| | | || || || | | |||| | ||||| ||||| | | | |
Sbjct 104829 CAACCCTCTTTGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGACA 104888
Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682
||||||| || ||||| || || | || || || |||| |||||| | || ||||
Sbjct 104889 TGAAGGAGGACAGTATCGACGGGATTTACGATACTCTCAAGACTTGTGCCATGATCTCCA 104948
Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG-TTACATT 363741
||||||| || || || ||| | |||||| | ||||| || || |||||||
Sbjct 104949 AGAATGCTGGAGGTATCGGTCTGAATGTCCACAGAATCCGTGC-CACTGGAGCTTACATT 105007
Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801
|||||| || |||| || || | ||||| ||||| || || || |||| ||
Sbjct 105008 GCTGGCACAAACGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACA 105067
Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861
|| || || || |||||||||||| |||||| || || || || || || ||||||
Sbjct 105068 GCCAGATATGTTGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAG 105127
Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAA 363921
|| || || ||| | |||||||| ||||| ||||| || ||| ||||| ||||||
Sbjct 105128 CCATGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAA 105187
Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981
| || || || ||||| ||||| || || ||| || | || | || |||||||| ||
Sbjct 105188 GTTCGCGCTCGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTGTT 105247
Query 363982 GAGGCAGGTAAGAAT------TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035
||| |||||| ||| |||| | ||||| |||| || || |||||| |
Sbjct 105248 GAG------AAGAATGGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCT 105301
Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095
||||| | |||||||| | || ||||| || || ||||| || | || || |||| |
Sbjct 105302 GATGTTTACGGTGACGAATTTGAGGCTCTCTATGAGAAGTACGAGGCAGAAGGCAAGGGT 105361
Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155
|| ||||| || || |||||||| |||| ||||| | || |||| | |||||
Sbjct 105362 CGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACC 105421
Query 364156 GGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214
|||| ||||| | ||| | ||||| ||| | |||||||| ||| || ||| || ||||
Sbjct 105422 GGAA-ACCCTTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGTAATCAGAAGAACCT 105480
Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273
|||||| | || |||| ||| || || || ||||| |||||||| || || ||||
Sbjct 105481 TGGTACCA-TCCGCAGCTCCAATCTCTGCACAGAGATAGTTGAATACTGTGCACCTGACG 105539
Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATG 364327
|| || || |||||| | || || | || || || | | || ||| ||||
Sbjct 105540 AGGTCGCTGTTTGTAACTTGGCTTCTCTTGCTCTCCCAACTTACGTCAACCAAAATGATG 105599
Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT-ACTTGCA-ATCTCG- 364384
| | | ||| ||| | ||| | || || || || | | | || | | || |
Sbjct 105600 GCAGCTACGACTTTCAGAAGCTTCACGATGT---CTGCCAGGTTGTCGTGAAGAACTTGA 105656
Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGT 364443
||||| | ||||||| || || || || |||| || || || | | ||| | |||
Sbjct 105657 ACAAGATCATCGACATCAACTACTACCCTGTTCCCGAGGCACGCAAGAGC-AATTTCCGT 105715
Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGAT 364502
|| | || |||| | ||||||| ||||| ||||| || || || | | | || | |
Sbjct 105716 CACAGACCTATTGCTGTTGGTGTCCAGGGTCTCGCCGATGTCTTCCTAGCTCTTCGA-CT 105774
Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562
|||| || || || || || ||| |||| ||||||| || || || ||
Sbjct 105775 CCCATTCGAGTCACCCGAGGCCAAACATCTCAATATCCAGATCTTCGAGACCATCTACCA 105834
Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622
|| || ||||| | || ||| | ||||| | || | ||| || || ||
Sbjct 105835 CGCTGCCTTGACTTCATCTGTTGAGCTTGCAAAGCAGCATGGTACTTACGAGACATACGA 105894
Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682
|| ||||| ||| || ||| | |||| | ||| | ||||| || || || | |
Sbjct 105895 AGGTTCCCCAGCTTCACAAGGAGAGCTCCAATACGATATGTGGAAGGTTACACCTACCGA 105954
Query 364683 CCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC---T 364738
| ||| |||||| || | | | ||| | ||| |||| ||| ||| ||| |
Sbjct 105955 TCTTTGGGACTGGGCCACCTTGAAGCAACAA-ATCAAGCAGCACGGTCTTCGTAACAGTT 106013
Query 364739 CCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGT 364798
|||||| || || ||||| || || ||| || ||||| || ||||||||
Sbjct 106014 TGCTCGTT---GCTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGT 106070
Query 364799 GCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGG 364858
| ||||| || | ||| ||| | || || || || || | | || ||||| | |
Sbjct 106071 GTTTCGAGCCATACACATCCAACATCTACTCCCGACGTGTCTTGGCTGGTGAATTCCAAG 106130
Query 364859 TAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGA 364918
| ||||| | | | ||||||||| ||| || || ||| || | |||||
Sbjct 106131 TCGTTAACCCTTGGTTGTTGAAGGATCTTGTCGATATGGGTCTCTGGTCAGATAACATGA 106190
Query 364919 AGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATC 364978
||||| ||||||||||| | ||||| | || || | || |||| | |||
Sbjct 106191 AGAACCGTATCATCGCCGATGGAGGTTCCATCCAAAATGTCCCTAATATTCCTGCCGATA 106250
Query 364979 TGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGG 365038
| ||| || ||||||| || || ||||| || ||| ||| || || || | ||||| |
Sbjct 106251 TCAAGGCTCTTTACAAGACTGTCTGGGAGATCTCCCAGCGTACCATCGTTCAGATGGCTG 106310
Query 365039 CCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAA 365098
| ||||| ||||| || ||| ||| ||| ||| | ||| | ||||| | ||||
Sbjct 106311 CTGATCGTGGTGCCTTCATCGACCAGTCCCAATCGATGAACATCCACATGAAGGATCCAA 106370
Query 365099 CCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| | |||| | || ||||| ||| || ||||| | ||||| ||||| ||
Sbjct 106371 CTATGGGCAAGATCACGAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAGACCGG 106428
>seq116
Length=2555478
Score = 86.0 bits (94), Expect = 2e-11
Identities = 93/121 (77%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCG-ACAA 111481
|| || |||||||| || ||||| || || | ||| ||||| || || |||||| ||
Sbjct 797563 AAGATCTGGGATGGCAACGGATCGCGCGAATATCTCGATTCGGTCGGG-TTGTCGCACCG 797621
Query 111482 CGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA 111541
|| || |||||||| ||||| || ||||| ||||| ||| | || ||||||||||| ||
Sbjct 797622 CGCAGTCGGTGATCTTGGACCTGTATACGGTTTTCAGTGGAGGCATTTTGGTGCAGAATA 797681
Query 111542 C 111542
|
Sbjct 797682 C 797682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350861328248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |