Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq95 87.8 2e-12
seq85 87.8 2e-12
>seq95
Length=967449
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|||||| | || || ||| | ||| || ||||| | ||||| ||||| |||
Sbjct 168764 ATTACCCTAGAGGTAGAGTCTTCCGATACTATCGACAACGTCAAGTCCAAGATCCAGGAC 168705
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || ||||| || ||||| ||||| | || || | || |||||||||||||||||||
Sbjct 168704 AAGGAGGGCATTCCCCCCGACCAACAACGCCTCATCTTCGCCGGCAAGCAACTCGAAGAT 168645
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199
| | | | | || ||| || ||||| || || || || || ||||| ||||
Sbjct 168644 GGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTTCATCTAGT 168592
>seq85
Length=1171154
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074
||||| || | || || |||||||||| | ||| |||||||| | |||||
Sbjct 580641 ACTGGCAAGACCATCACTCTCGAAGTCGAATCATCCGATACCATCGACAATGTCAAGTCG 580700
Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134
||||| ||||| || ||||| ||||||||||| || | |||| | || ||| |||
Sbjct 580701 AAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAGCAACGTTTGATCTTCGCCGGAAAG 580760
Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187
||||||||||||| | | | | | |||||| ||||| || || || || ||
Sbjct 580761 CAACTCGAAGATGGCCGCACCCTGTCCGATTACAACATCCAGAAGGAGTCCAC 580813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935140665420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |