Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq95 87.8 2e-12 seq85 87.8 2e-12 >seq95 Length=967449 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 |||||| | || || ||| | ||| || ||||| | ||||| ||||| ||| Sbjct 168764 ATTACCCTAGAGGTAGAGTCTTCCGATACTATCGACAACGTCAAGTCCAAGATCCAGGAC 168705 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || ||||| ||||| | || || | || ||||||||||||||||||| Sbjct 168704 AAGGAGGGCATTCCCCCCGACCAACAACGCCTCATCTTCGCCGGCAAGCAACTCGAAGAT 168645 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | | | | | || ||| || ||||| || || || || || ||||| |||| Sbjct 168644 GGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTTCATCTAGT 168592 >seq85 Length=1171154 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || || |||||||||| | ||| |||||||| | ||||| Sbjct 580641 ACTGGCAAGACCATCACTCTCGAAGTCGAATCATCCGATACCATCGACAATGTCAAGTCG 580700 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| || ||||| ||||||||||| || | |||| | || ||| ||| Sbjct 580701 AAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAGCAACGTTTGATCTTCGCCGGAAAG 580760 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 ||||||||||||| | | | | | |||||| ||||| || || || || || Sbjct 580761 CAACTCGAAGATGGCCGCACCCTGTCCGATTACAACATCCAGAAGGAGTCCAC 580813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935140665420