Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq116 89.7 5e-13
>seq116
Length=2555478
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431
|||| ||| ||||| || || ||||| | || ||| || ||||| ||| | | |
Sbjct 797837 AACATGTGGCAGGGAGGTAGGGCCATGAGTTTCATATCCTTAGGATTCCAGGCAGAAAAA 797778
Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491
|| || |||| || | ||||| ||||| | | || | | | || | ||||||
Sbjct 797777 ATTATCCTTCGGTCATAAGGATTGTTTTTCAGTTTATGGATCACCTCCGCAAGCTGGTCA 797718
Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551
| || || |||||||| || | || || || ||||| | || ||||| |||||||||
Sbjct 797717 ACACCTTGTCCTGTATAATCCGTCTCGGCATCGACGTATTCTGCACCAAAATGCCTCCAC 797658
Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCC 20580
|| |||||||| |||||||| | ||| ||
Sbjct 797657 TGAAAACCGTATACAGGTCCAAGATCACC 797629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441371895185760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |