Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq116 89.7 5e-13 >seq116 Length=2555478 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| ||||| || || ||||| | || ||| || ||||| ||| | | | Sbjct 797837 AACATGTGGCAGGGAGGTAGGGCCATGAGTTTCATATCCTTAGGATTCCAGGCAGAAAAA 797778 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 || || |||| || | ||||| ||||| | | || | | | || | |||||| Sbjct 797777 ATTATCCTTCGGTCATAAGGATTGTTTTTCAGTTTATGGATCACCTCCGCAAGCTGGTCA 797718 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | || || |||||||| || | || || || ||||| | || ||||| ||||||||| Sbjct 797717 ACACCTTGTCCTGTATAATCCGTCTCGGCATCGACGTATTCTGCACCAAAATGCCTCCAC 797658 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCC 20580 || |||||||| |||||||| | ||| || Sbjct 797657 TGAAAACCGTATACAGGTCCAAGATCACC 797629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441371895185760