Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq85 89.7 1e-12 >seq85 Length=1171154 Score = 89.7 bits (98), Expect = 1e-12 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 243505 ATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTT 243564 || || || || ||||| | ||| | || ||| | || ||| |||| || ||| Sbjct 1031253 ATTACCGAGGCTGTTGAGATCGAGCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTT 1031194 Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 | ||||||||| ||| | ||| || ||||| || ||||| || || || | || Sbjct 1031193 CTCGGCATGAACGCTGCTTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTC 1031134 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 |||| || ||| | ||||| ||||| ||| ||||| || | ||| |||||| | Sbjct 1031133 CTCGCTCTCGGTAACGAGAAGTATTACAAGTCCGCCAACCCATTCGACTTCATGGAGAAC 1031074 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCT 243744 || || ||| || || || ||||||||||| ||||||||| || || ||| || Sbjct 1031073 ATCTCTCTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTACCAAAAAGCT 1031014 Query 243745 GGTGTGATG 243753 ||||| ||| Sbjct 1031013 GGTGTTATG 1031005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877682573400