Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq145 288 1e-72 seq85 145 9e-30 >seq145 Length=311005 Score = 288 bits (318), Expect = 1e-72 Identities = 1124/1747 (64%), Gaps = 49/1747 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || ||||| || ||| ||||||| || | ||||| | Sbjct 106443 CGGAGGTAGTACATGCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTG 106384 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | |||||| | |||| || |||||| |||||| || ||||||||| Sbjct 106383 ATCTTGCCCATAGTTGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAG 106324 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 |||||||| || ||||| | || | | | | || | || ||||| ||||| Sbjct 106323 GCACCACGATCAGCAGCCATCTGAACGA--TGGTACG-CTGGGAGATCTCCCAGACAGTC 106267 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||| || ||| ||||| | || |||| || |||||||||||| || || | Sbjct 106266 TTGTAAAGAGCCTTGATATCGGCAGGAATATTAGGGACATTTTGGATGGAACCTCCATCG 106207 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 || || | | |||||| | | |||||||||||| || | ||||||| || Sbjct 106206 GCGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTCAAC 106147 Query 113894 AG---ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950 | | | ||| || || || ||||| || | | |||| ||||| ||| Sbjct 106146 AACCAAGGGTTA---ACGACTTGGAATTCACCAGCCAAGACACGTCGGGAGTAGATGTTG 106090 Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010 | ||||||||||| || ||||| ||| || | |||||| ||| ||| || ||| Sbjct 106089 GATGTGTATGGCTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGC 106030 Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070 || || || | ||| | |||||||| ||||| | | | | || ||| ||| | || | Sbjct 106029 ATAGGAGCAACGAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTG 105970 Query 114071 TCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 114128 ||||||| | || | | || | || | ||||||||| | ||||| |||| Sbjct 105969 GCCCAGTCCCAAA-GATCGGTAGGTGTAACCTT-CCACATATCGTATTGGAGCTCTCCTT 105912 Query 114129 GGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG-AG 114187 | || ||||| || || || |||||||||| | || | || || | || || Sbjct 105911 GTGAAGCTGGGGAACCTTCGTATGTCTCGTAAGTACCATGCTGCTTTGCAAGCTCAACAG 105852 Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247 | || ||| | ||||| || || ||||| || || | ||| | |||||| Sbjct 105851 ATGAAGTCAAGG-CAGCGTGGTAGATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCC 105793 Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATA--AATACATCCGCGAGACCTTGGACAC 114305 ||| || || || | |||||| | | || || ||||| |||||||| ||||||| Sbjct 105792 TCGGGTGACTCGAATGGGAGTCG--AAGAGCTAGGAAGACATCGGCGAGACCCTGGACAC 105735 Query 114306 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAA 114362 | | |||| || | || | | ||| ||| || || ||| || || || Sbjct 105734 CAACAGCAATAGGTCTGTGACGGAAATTGCTCTTGCGTGC---CTCGGGAACAGGGTAGT 105678 Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422 | || | ||||| | | | || | || || |||||||| || || ||||||| Sbjct 105677 AGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACATCGTGAAGCT 105618 Query 114423 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482 | | | || | |||| | | || ||||| || | || || || | || |||| Sbjct 105617 TCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCA 105558 Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542 ||||| |||| | ||| || || ||| || | || || || || | ||| | Sbjct 105557 AGTTACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACTATCTCTGTGCAGAGATTGG 105498 Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 114602 | || ||||| || | |||||| ||||| |||| ||| || ||||||||||| | Sbjct 105497 AGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCTTTCGGTTGCAAGCATCCTTGTAGA 105438 Query 114603 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCG 114661 ||||| | || | || ||||| ||||| | || ||| || | | ||| | | || | | Sbjct 105437 GCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTCTGGG 105378 Query 114662 GCTGGCACAGTGGCGTTGGCTCGCCCCT--CCT----CCTCGTACTTTGTGTAGAGGGCT 114715 || | ||| ||| || |||| ||| |||||||||| ||||| || Sbjct 105377 CCTTGA----TGGTCTTG---CGACCCTTGCCTTCTGCCTCGTACTTCTCATAGAGAGCC 105325 Query 114716 TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGAC 114775 ||||| || ||||| | || | || || || || | ||||| | || | | Sbjct 105324 TCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTGTC 105265 Query 114776 CATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG 114835 ||| |||| || ||||||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct 105264 CATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGAAG 105205 Query 114836 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 114895 ||||| ||| |||| |||| || | || || || || | || | || || | | Sbjct 105204 AGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAG 105145 Query 114896 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCC 114952 | ||| |||||||| || || ||||| | ||||| | || || | ||| || Sbjct 105144 ACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCCACCC 105085 Query 114953 TGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGAT 115012 |||| ||||| || |||||| || || || || ||||| |||| ||||| | || Sbjct 105084 TGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAG 105025 Query 115013 TGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCA 115072 | || ||||| || ||| || | |||| | || |||| | || ||| Sbjct 105024 TTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCG 104965 Query 115073 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCG 115132 ||||| || || ||| ||||| || || | ||||| | |||| ||||||||| Sbjct 104964 ATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCGTAAATCCCGTCG 104905 Query 115133 ATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 115192 || ||| |||| | |||| | |||||| || | ||||| |||||| || Sbjct 104904 ATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTTGTGGTGTGCCG 104845 Query 115193 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGG 115250 ||| ||||||||||| | |||||| || | | |||| |||||| || ||| | Sbjct 104844 GCGGCAAAGAGGGTTGGAGACGCGTG--TGTAAAGTACTTGCTGGACATTAAATTGTATG 104787 Query 115251 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 115310 |||| | | ||| || |||||||||||||||| | || | ||| | ||||| Sbjct 104786 TCTCGATAGCACTCTCAATATCATCCCCGTGAATACCGACAGCCACTCTCATGATCATGT 104727 Query 115311 ATTGGGG 115317 ||| || Sbjct 104726 GTTGTGG 104720 >seq85 Length=1171154 Score = 145 bits (160), Expect = 9e-30 Identities = 305/450 (68%), Gaps = 6/450 (1%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| | || ||||||||||||||||| ||||| ||| | | ||| |||||||| Sbjct 1031023 GTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCAT 1031082 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || |||||||| || || || || | | ||| | | ||| ||| Sbjct 1031083 GAAGTCGAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAG--GAGCAGA 1031140 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 ||||| | |||| |||||||||| | |||| ||| |||||| |||| || | Sbjct 1031141 CGATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCA 1031200 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || || || | |||| | | ||| || || || || || | | | | Sbjct 1031201 CAGGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCGGTAATAACGTCT 1031260 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGA-GTTCCACGGCAAACTC 126054 || | | | | | || | || | ||| ||| | | || |||||| || Sbjct 1031261 TGGACTGCTTGCTTGCTTGGACGATGGTTCAAGTGGGAGAACAAGAGGCA-GGCAAAGTC 1031319 Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114 ||||||||| ||||||||||||||||| || || |||||| || |||||||| || Sbjct 1031320 GGTGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCAG 1031379 Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| ||||||||||||||||| || | |||||||| ||||||||||| ||||| || Sbjct 1031380 ACCACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCAAC 1031439 Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAA 126204 | || || |||| |||||||| ||| || Sbjct 1031440 AGCGGCAAAGGCAACGAGACGCTGAGCGAA 1031469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352375425120