Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq85 93.3 4e-14
seq95 82.4 7e-11
>seq85
Length=1171154
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||| ||||| || |||||| | ||| ||| || | |||
Sbjct 580819 TGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCTTCGAGTTGC 580760
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
||||| ||| | ||||| |||||||| || || || ||||| || || ||||| || ||
Sbjct 580759 TTTCCGGCGAAGATCAAACGTTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGGATCTTC 580700
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|||| || | ||| ||||| || |||||||||||||| | || ||||| ||
Sbjct 580699 GACTTGACATTGTCGATGGTATCGGATGATTCGACTTCGAGAGTGATGGTCTTGCCAGTA 580640
Query 45318 AGAGTTTTTAC 45328
||||| || ||
Sbjct 580639 AGAGTCTTGAC 580629
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || || |||||||| ||||| || ||||| || || | || ||
Sbjct 580533 ACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTCCTCG 580474
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || || || ||| | ||||| || |||||||| || |||||||| || || |||||
Sbjct 580473 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTTGG 580414
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| || |||| || | ||||| ||||||||||| |||||||| | || |||
Sbjct 580413 ATCTTGCTCTTGACATTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTTG 580354
Query 45312 CCGGT 45316
|||||
Sbjct 580353 CCGGT 580349
>seq95
Length=967449
Score = 82.4 bits (90), Expect = 7e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| ||||| | | |||||||| || || || ||||| ||||| || || ||| |
Sbjct 168574 CCTCCACGGAGACGGAGGACTAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 168633
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| || | ||| || || ||| | || | ||||| ||||| || |||
Sbjct 168634 AGGGTACGGCCATCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGA 168693
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
||||| || || || || || || |||| || | || | || ||||||||||| ||
Sbjct 168694 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATAGTATCGGAAGACTCTAC 168752
Query 45293 TTCGAGAGTAACCGTTTTGCCGGT 45316
|| || |||| || ||||| ||
Sbjct 168753 CTCTAGGGTAATTGTCTTGCCCGT 168776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002273393440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |