Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq145 257 2e-63
seq85 141 1e-28
>seq145
Length=311005
Score = 257 bits (284), Expect = 2e-63
Identities = 1120/1751 (64%), Gaps = 57/1751 (3%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|||||||||||||| || ||||| || ||| ||||||| || | ||||| |
Sbjct 106443 CGGAGGTAGTACATGCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTG 106384
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | |||||| | |||| || |||||| |||||| || |||||||||
Sbjct 106383 ATCTTGCCCATAGTTGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAG 106324
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734
|| ||||| || ||||| | || | | | | || | || ||||| |||||
Sbjct 106323 GCACCACGATCAGCAGCCATCTGAACGA--TGGTACG-CTGGGAGATCTCCCAGACAGTC 106267
Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794
|||| || ||| ||||| | || |||| || ||||||||| || |||| |
Sbjct 106266 TTGTAAAGAGCCTTGATATCGGCAGGAATATTAGGGACATTTTGGATGGA---ACCTCCA 106210
Query 115795 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851
| | | |||| | | |||||| | | |||||||||||| || | ||||||| |
Sbjct 106209 TCGGCGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTC 106150
Query 115852 A----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 115907
| | | | | || || || || ||||| || | | |||| |||||
Sbjct 106149 AACAACCAAGGG----TTAACGACTTGGAATTCACCAGCCAAGACACGTCGGGAGTAGAT 106094
Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 115967
||||| ||||||||||| || ||||| ||| || | |||||| || ||| ||
Sbjct 106093 GTTGGATGTGTATGGCTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGT 106034
Query 115968 GGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAG 116027
||||| || || | ||| | ||||| || ||||| | | | || ||| ||| |
Sbjct 106033 TGGCATAGGAGCAACGAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAA 105974
Query 116028 GGCGTCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTCCCACATATCAAACTGGAGGATA 116085
|| | ||||||| | || | | || | || ||| ||||||| | |||||
Sbjct 105973 GGTGGCCCAGTCCCAAA-GATCGGTAGGTGTAACCTTCC-ACATATCGTATTGGAGCTCT 105916
Query 116086 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 116145
||||| || ||||| || || || ||||||| || | || | || || | ||
Sbjct 105915 CCTTGTGAAGCTGGGGAACCTTCGTATGTCTCGTAAGTACCATGCTGCTTTGCAAGCTCA 105856
Query 116146 G-AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 116204
|| | || ||| | ||||| || || ||||| || || | ||| | ||
Sbjct 105855 ACAGATGAAGTCAAGG-CAGCGTGGTAGATGGTCTCGAAGATCTGGATATTGAGATGTTT 105797
Query 116205 GGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATA--AATACATCCGCGAGACCTTGG 116262
||||||| || || || | ||| || | | || || ||||| |||||||| |||
Sbjct 105796 GGCCTCGGGTGACTCGAATGGGAGTCG--AAGAGCTAGGAAGACATCGGCGAGACCCTGG 105739
Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGA 116319
||||| | |||| || | || | | ||| ||| || || ||| || ||
Sbjct 105738 ACACCAACAGCAATAGGTCTGTGACGGAAATTGCTCTTGCGTGC---CTCGGGAACAGGG 105682
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
|| | || | ||||| | | | || | || || |||||||| || || |||
Sbjct 105681 TAGTAGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACATCGTGA 105622
Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 116439
||||| | | || | |||| | | || ||||| || | || || || | ||
Sbjct 105621 AGCTTCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAA 105562
Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499
|||| ||||| |||| | ||| || || ||| || | || || || || | |
Sbjct 105561 GCCAAGTTACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACTATCTCTGTGCAGAGA 105502
Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559
|| || || ||||| || | |||||| ||||| |||| ||| || |||||||||
Sbjct 105501 TTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCTTTCGGTTGCAAGCATCCTTG 105442
Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618
|||||||| | || | || ||||| ||||| | || ||| || | | ||| | | ||
Sbjct 105441 TAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTC 105382
Query 116619 GGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT--CCT----CCTCGTACTTTGTGTAGAG 116672
| | || | ||| ||| || |||| ||| |||||||||| |||||
Sbjct 105381 TGGGCCTTGA----TGGTCTTG---CGACCCTTGCCTTCTGCCTCGTACTTCTCATAGAG 105329
Query 116673 GGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732
|||||||| || ||||| | | || | || || || || | || || | ||
Sbjct 105328 AGCCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAG 105269
Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792
| |||| |||| || |||||| |||||||||||||| ||||| ||||| || || |
Sbjct 105268 TGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTA 105209
Query 116793 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 116852
||||||||| ||| |||| |||| || | || || || || | || | || ||
Sbjct 105208 GAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTC 105149
Query 116853 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACC 116909
| || ||| |||||||| || || ||||| | ||||| | || ||| | ||
Sbjct 105148 AAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCC 105089
Query 116910 AGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATC 116969
| |||||| ||||| || || || ||| || || || ||||| |||| ||||| |
Sbjct 105088 ACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTT 105029
Query 116970 AGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCAT 117029
|| | || ||||| || ||| || |||| | || ||||| | ||
Sbjct 105028 GGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAG 104969
Query 117030 ACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCC 117089
||| ||||| || || ||| ||||| || || | ||||| | |||| |||||
Sbjct 104968 ACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCGTAAATCCC 104909
Query 117090 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 117149
||||| ||| |||| | |||| | |||||| || | ||||| ||||||
Sbjct 104908 GTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTTGTGGTGT 104849
Query 117150 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCG 117207
|| ||| ||||||||||| | |||||| || | | |||| |||||| || |
Sbjct 104848 GCCGGCGGCAAAGAGGGTTGGAGACGCGTG--TGTAAAGTACTTGCTGGACATTAAATTG 104791
Query 117208 TAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAAC 117267
|| ||||| | || ||| || |||||||||||||||| | || | ||| | |
Sbjct 104790 TATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATACCGACAGCCACTCTCATGATC 104731
Query 117268 ATGTATTGGGG 117278
|||| ||| ||
Sbjct 104730 ATGTGTTGTGG 104720
>seq85
Length=1171154
Score = 141 bits (156), Expect = 1e-28
Identities = 302/444 (68%), Gaps = 8/444 (2%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| |||| ||||||||||||||||| ||||| || | || ||| ||||||||
Sbjct 1031023 GTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCAT 1031082
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || |||||||| || || || || | | ||| | | ||| |||
Sbjct 1031083 GAAGTCGAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAG--GAGCAGA 1031140
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
||||| | |||| |||||||||| | |||| ||| |||||| |||| || |
Sbjct 1031141 CGATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCA 1031200
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| || || || || | |||| | | ||| || || ||||| || | | | |
Sbjct 1031201 CAGGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCGGTAATAACGTCT 1031260
Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGA-GTTCCACAGCAAACT 127526
|| | | | | | || | || | | |||| ||| | | || ||||| |
Sbjct 1031261 TGGACTGCTTGCTTGCTTGGACGATGGT-TCAAGTGGGAGAACAAGAGGCAG-GCAAAGT 1031318
Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586
| ||||||||| ||||||||||||||||| || || |||||| ||||||||||| |
Sbjct 1031319 CGGTGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCA 1031378
Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646
|||| ||||||||||||||||| || | ||||| || ||||||||||| ||||| |
Sbjct 1031379 GACCACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCAA 1031438
Query 127647 CACACGCGAACGCAAATAGACGCT 127670
|| || || |||| |||||||
Sbjct 1031439 CAGCGGCAAAGGCAACGAGACGCT 1031462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505942310240
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