Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq52 102 3e-16
seq85 96.9 1e-14
>seq52
Length=538554
Score = 102 bits (112), Expect = 3e-16
Identities = 187/274 (68%), Gaps = 9/274 (3%)
Strand=Plus/Minus
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
|||| || || || || ||||| ||| | ||||| || || ||||| ||||| || || |
Sbjct 345627 TTACCGTCCCAGCATACTTCAACGATTCGCAACGTCAGGCTACTAAGGATGCTGGTCAAA 345568
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
|||| ||| | || ||||| || | | || || || || || || ||||| || ||||
Sbjct 345567 TTGCAGGTCTTAACGTTCTCCGTGTAGTCAACGAGCCAACCGCTGCCGCTCTTGCTTATG 345508
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| | | | ||| | ||||| || | |||| || | |||| |||||||||
Sbjct 345507 GGTTGG-------AGAAGGAT--GAAGACAAGATTATTGCTGTCTATGATCTTGGTGGAG 345457
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
|||| ||||| || || ||| || | | || ||||| || || ||| | ||||
Sbjct 345456 GAACCTTTGATATCTCCGTTCTTGAGATCCAGAAGGGTGTATTCGAGGTCAAGTCCACCA 345397
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602
| ||||| ||||| | || || || ||| ||||
Sbjct 345396 ACGGTGACACTCACTTGGGTGGAGAGGATTTTGA 345363
>seq85
Length=1171154
Score = 96.9 bits (106), Expect = 1e-14
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || || || || || |||||||||
Sbjct 580845 ATGCAGATTTTCGTCAAGACTCTGACCGGAAAGACAATCACACTCGAGGTCGAATCATCT 580904
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||| | || ||| || || || ||||| || || || || || ||
Sbjct 580905 GATACTATTGATAACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 580964
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | |||||| | || || |||||||| ||||| | || ||| | ||||||||
Sbjct 580965 CAGAGACTCATTTTCGCTGGAAAGCAACTTGAGGATGGCCGTACCTTGTCTGATTATAAC 581024
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
|| | ||||| | || |||||
Sbjct 581025 ATCCAGAAGGAGTCTACTCTTCA 581047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975714248521712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |