Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq145 342 6e-89
seq85 150 2e-31
>seq145
Length=311005
Score = 342 bits (378), Expect = 6e-89
Identities = 929/1396 (67%), Gaps = 37/1396 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
||||| ||||| ||||| | || || ||||||| || ||||| |||||||| || |
Sbjct 104720 CCACAACACATGATCATGAGAGTGGCTGTCGGTATTCACGGGGATGATATTGAGAGTGCT 104779
Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||||||| | |||||| | ||| || | ||||| | |||||||||||
Sbjct 104780 ATCGAGACATACAATTTAATGTCCAGCAAGTACTTT-ACACACGCGTCTCCAACCCTCTT 104838
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| || |||||| | | ||| | || || ||| | || | | ||||||||
Sbjct 104839 TGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGACATGAAGGAGGA 104898
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
||| | || ||||||| ||||||| |||||| ||||| ||| |||||
Sbjct 104899 CAGTATCGACGGGATTTACGATACTCTCAAGACTTGTGCCATGATCTCCAAGAATGCTGG 104958
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910
|||||||| || | |||| || | |||| || ||| || |||||
Sbjct 104959 AGGTATCGGTCTGAATGTCCACAGAATCCGTGCCACTGGAGCTTACATTGCTGGCACAAA 105018
Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970
|| | || | |||||| |||| ||||| || || || ||| |||||| | |||||
Sbjct 105019 CGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACAGCCAGATATGT 105078
Query 111971 AAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 112027
|||| | ||| | ||| || || |||| |||| || ||||||||||||||
Sbjct 105079 TGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAGCCATGGCACGC 105138
Query 112028 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGC 112085
||| || | ||||||||||| | || ||||| || | ||||| | |||| |
Sbjct 105139 TGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAAGTTCGCGCT-- 105196
Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145
||||||||||||| |||||| |||||||||||||||||||||||| | |||||| ||| |
Sbjct 105197 CGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTGTTGAGAAGAAT 105256
Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205
|| | ||| | || | || || || || |||||||| | |||| |||||
Sbjct 105257 GGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCTGATGTTTACGGTGAC 105316
Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGC 112263
|| ||||| || ||||| |||||||||| || ||| | | | | || ||| | |
Sbjct 105317 GAATTTGAGGCTCTCTATGAGAAGTACGAGGCAG-AAGGCAAGGGTC-GCAAGACCAT-C 105373
Query 112264 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322
|| | || | | ||| | | || ||| || | ||||||||||| || | || |
Sbjct 105374 AAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACCGGAAACCCTTTC 105433
Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382
||||| ||||| || || || |||| |||||||||||| ||||| | ||| |||
Sbjct 105434 ATGCTCTACAAGGATGCTTGCAACCGAAAGAGTAATCAGAAGAACCTTGGTACCATCCGC 105493
Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACGGCTGTGT 112440
|| ||||| ||||| ||||| || | ||| ||| | || || ||| ||||| |
Sbjct 105494 AGCTCCAATCTCTGCACAGAGATAGTTGAA--TACTGTGCACCTGACGAGGTCGCTGTTT 105551
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGA 112498
||||| | || || | |||||||| | || || | ||| | | | | || | ||
Sbjct 105552 GTAACTTGGCTTCTCTTGCTCTCCCAACTTACGT-CAACCA-AAATGATGGCAGCTACGA 105609
Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558
| | | || || ||||| || | |||| || ||| | |||| | || ||
Sbjct 105610 CTTTCAGAAGCTTCACGATGTCTGCCAGGTTGTCGTGAAGAACTTGAACAAGATCATCGA 105669
Query 112559 TAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615
| || | ||||| ||| ||| || || || ||| | | ||| | || ||
Sbjct 105670 CATCAACTACTACCCTGTTCCCGAG---GCACGCAAGAGCAATTTCCGTCACAGACCTAT 105726
Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTC 112675
|| | | |||||||| |||||||| ||||| ||| | | ||| | | |||| || ||
Sbjct 105727 TGCTGTTGGTGTCCAGGGTCTCGCCGATGTCTTCCTAGCTCTTCGACTCCCATTCGAGTC 105786
Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735
||| || || | ||||| | || || ||||| || || ||||| || |||||
Sbjct 105787 ACCCGAGGCCAAACATCTCAATATCCAGATCTTCGAGACCATCTACCACGCTGC-CTTGA 105845
Query 112736 GGCGA---GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792
| ||| ||| | ||| || ||||| | || || || | || ||||| ||
Sbjct 105846 CTTCATCTGTT--GAGCTTGCAAAGCAGCATGGTACTTACGAGACATACGAAGGTTCCCC 105903
Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACG 112851
|||||||||||| | ||| |||| ||||||| ||||||| | ||| | | || | |
Sbjct 105904 AGCTTCACAAGGAGAGCTCCAATACGATATGT-GGAAGGTTACACCTACCGATCTTTGGG 105962
Query 112852 ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911
|||||| | | | ||| ||| |||||| || | ||||||||||||||| | | | |
Sbjct 105963 ACTGGGCCACCTTGAAGCAACAAATCAAGCAGCACGGTCTTCGTAACAGTTTGCTCGTTG 106022
Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971
| || |||||||| ||| ||| |||||| | || || || || || || || |
Sbjct 106023 CTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGTGTTTCGAGCCAT 106082
Query 112972 ACACGACGAACATCTA 112987
|||| | ||||||||
Sbjct 106083 ACACATCCAACATCTA 106098
>seq85
Length=1171154
Score = 150 bits (166), Expect = 2e-31
Identities = 310/456 (68%), Gaps = 20/456 (4%)
Strand=Plus/Minus
Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233
|| ||| |||| ||| | || ||||| ||||||||||||||||||||| ||||| |||
Sbjct 1031469 TTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCATTC 1031410
Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293
| |||| | ||| | |||||||| ||||| ||||||||||| |||||||||||||
Sbjct 1031409 GCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAACGAG 1031350
Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTT-TTCAAATTATT 102352
|| ||||| |||||||| || |||||| || ||||| || ||| ||| |
Sbjct 1031349 CTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGC-CTGCCTCTTGTTC-------T 1031298
Query 102353 GCGTATTAAACCAACGACTGAG--ACTATTCATTCTA-----TTGTTAAGGAAGCCGTTG 102405
| || ||||| || | || | | || || | || ||| || || ||||
Sbjct 1031297 CCCACTTGAACCATCGTCCAAGCAAGCAAGCAGTCCAAGACGTTATTACCGAGGCTGTTG 1031238
Query 102406 AGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTG 102465
|||| ||| | | ||| | ||||| ||||| || ||||| |||| ||||| |||
Sbjct 1031237 AGATCGAGCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCTG 1031178
Query 102466 AAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGC 102525
|||| |||| ||||||| || ||||| | || | | || |||
Sbjct 1031177 CTTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCT--CCTCGCTCTCGGTAA 1031120
Query 102526 CTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGG 102583
| || || || ||| || ||||| ||||||||||||||||| || | |||
Sbjct 1031119 CGAGAAGTATTACAAGTCCGCCAACCCATTCGACTTCATGGAGAACATCTCTCTTGCCGG 1031060
Query 102584 GAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619
||||| ||||||||||| ||| | || | |||||
Sbjct 1031059 AAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTA 1031024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741127478080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |