Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq145 250 3e-61
seq59 114 2e-20
seq95 86.0 7e-12
seq52 86.0 7e-12
seq47 86.0 7e-12
>seq145
Length=311005
Score = 250 bits (276), Expect = 3e-61
Identities = 1124/1752 (64%), Gaps = 63/1752 (4%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556
||||||||| || ||||| |||||||| |||||||||||| ||||| | ||||| |
Sbjct 106351 GTTCATCGATTGGGACTGGTCGATGAAGGCACCACGATCAGCAGCCATCTGAACGATGGT 106292
Query 109557 ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC 109616
|| || || || ||||||||||||||||| | | ||||||||| | ||||| |
Sbjct 106291 ACGCT---GGGAGATCTCCCAGACAGTCTTGTAAAGAGCCTTGATATCGGCAGGAATATT 106235
Query 109617 CACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCA 109676
|| ||||| || || || ||| | | || | | |||||| | | |||||
Sbjct 106234 AGGGACATTTTGGATGGAACCTCCATCGGCGATGATACGGTTCTTCATGTTATCTGACCA 106175
Query 109677 GAGACCGACCTTTTTGAGATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACCA 109734
|||||| | | ||||| | |||||| | | ||| || || |||||||||
Sbjct 106174 GAGACCCATATCGACAAGATCCTTCAACAACCAAGG--GTTAACGACTTGGAATTCACCA 106117
Query 109735 GCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCT 109794
|| | |||||| ||||||||| | ||||| || ||||||||||| ||| |||
Sbjct 106116 GCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGGCTCGAAACACTCGTTGAAGCCA 106057
Query 109795 AGGATTTGTGCAGTGGAA---GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851
|||||||| | ||| | || || ||||| ||||| | ||| | |||||| || |||
Sbjct 106056 AGGATTTG---ACTGGTACTGGCAGTTGGCATAGGAGCAACGAGCAAACTGTTACGAAGA 106000
Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC 109911
|| | | ||| | | | || | | |||| || || || | || | ||
Sbjct 105999 CCGTGCTGCTTGATTTGTTGCTTCAAGGTGGCCCAGTCCCAAAGATCGGTAGGTGTA--- 105943
Query 109912 TCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTC 109971
||| ||| ||||||| ||| || | || | | ||| || ||||| | | | ||
Sbjct 105942 --ACCTTCC-ACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGAACCTTCGTATGTC 105886
Query 109972 TCGTACGACCCCTCAACCTCGGCCAACTCG---GATGAAGCCTCTAGTGCCGCATGATAC 110028
||||| | || | || || | ||| ||||||| || || || || || ||
Sbjct 105885 TCGTAAGTACCATGCTGCTTTGCAAGCTCAACAGATGAAG--TCAAG-GCAGCGTGGTAG 105829
Query 110029 ATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA 110088
|| ||||| || || || ||| | | | ||| | ||||| || || | |
Sbjct 105828 ATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCCTCGGGTGACTCGAATGGGAGTCGA 105769
Query 110089 CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATG 110148
| | || ||||| || |||||||| ||||| | | |||| || | || |
Sbjct 105768 AGAGCTAGGAAGACATCGGCGAGACCCTGGACACCAACAGCAATAGGTCTGTGACGGAAA 105709
Query 110149 TTAGAGCGTCGAGCAGTTTCT-----ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGA 110203
|| || || || || || || ||||| ||||| |||||||| | || |
Sbjct 105708 TT---GC-TCTTGC-GTGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCA 105654
Query 110204 GATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCT 110263
|||||| ||| || || || || || || | | ||| | | | | ||
Sbjct 105653 AGTTCTTCACGACAACCTGGCAGACATCGTGAAGCTTCTGAAAGTCGTA-GCTGCCATCA 105595
Query 110264 CCTTA-TTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCT 110322
|| ||||| || | |||||||||| ||| || | || || |||| ||||||
Sbjct 105594 TTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCA 105535
Query 110323 TTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTC 110382
| |||||| | || || || || | ||||| || ||| ||| | ||||
Sbjct 105534 GGTGCACAGTATTCAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTC 105475
Query 110383 TTCTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTC 110441
|||||||| | ||| | |||||| |||||||| ||||||||| | ||| | || || ||
Sbjct 105474 TTCTGATTACTCTTTCG-GTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTC 105416
Query 110442 CGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGC 110498
|| || | || ||| |||| | ||| | | || | ||| || || |||| | |
Sbjct 105415 GGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTCTG-GGCCTTGATGGTCTTGCG--ACC 105359
Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558
||||| |||||||||| || | |||||||||| | ||||| |||||||
Sbjct 105358 CTTGCCTTCTGCCTCGTACTTCTCATAGAGAGCCTCAAATTCGTCACCGTAAACATCAGC 105299
Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618
|||||| || || ||| || | || | ||| | ||| || |||||| | |||
Sbjct 105298 AAGACCGGGGCACTCGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTT 105239
Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATC 110678
|||||| || || |||||||| | || |||| || || || ||| | || || |
Sbjct 105238 CATGAAGAGATCTGGAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTT 105179
Query 110679 ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738
|| ||||| || || || | || || | || ||| | ||||||||| ||||| ||
Sbjct 105178 TCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTA 105119
Query 110739 GACAGCGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGC 110792
|| |||| | || |||| | |||| |||| |||||| | ||||||
Sbjct 105118 GATCGCGAAAGCACCAGGGCGCTTATTTCCACCC---TGGTCAACATATCTGGCTGTGTT 105062
Query 110793 ATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCT 110852
||||| || | ||||||||||| ||| || | ||| | || ||||| || |||
Sbjct 105061 GTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTA 105002
Query 110853 GGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT 110912
| | ||||||| || ||||| || || ||| ||||| || || ||| ||
Sbjct 105001 AGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCGATACCTCCAGCATTCTTGGAGAT 104942
Query 110913 TTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAA 110971
||||| ||| |||| ||| | ||||| || || || || |||| || | |
Sbjct 104941 CATGGCACAAGTCT-TGAGAGTATCGTAAATCCCGTCGATACTGTCCTCCTTCATGTCGA 104883
Query 110972 TTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCG 111031
| | ||||| ||||| | || | | || || || || ||||| || || | ||
Sbjct 104882 TCAAGAAGCATGAAGAGAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACG 104823
Query 111032 CATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATC 111089
| || || | || |||| |||||| |||||||| |||| || | |||
Sbjct 104822 CGTG--TGTAAAGTACTTGCTGGACATTAAATTGTATGTCTCGATAGCACTCTCAATATC 104765
Query 111090 TTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTT 111149
| ||||||||||| | || |||| ||||| ||| | ||| || |||| | |||
Sbjct 104764 ATCCCCGTGAATACCGACAGCCACTCTCATGATCATGTGTTGTGGACGTTCGGCAATCTT 104705
Query 111150 TCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATC 111209
|| || | ||| ||||||| |||| || ||||||| ||||||||| | |
Sbjct 104704 GCCCTCGAGACGGAGAAGGTATGATCTCTCAAGAGTCTTGAATCCAAAGTATTGGTAGTT 104645
Query 111210 GAAATCACGATC 111221
|||||| |||||
Sbjct 104644 GAAATCCCGATC 104633
>seq59
Length=800985
Score = 114 bits (126), Expect = 2e-20
Identities = 279/413 (68%), Gaps = 16/413 (4%)
Strand=Plus/Minus
Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564
|||||||||||| || || | || || | |||||||| ||| | ||| ||| | ||
Sbjct 82160 ATCGAAACGACCAGGACGCATAAGCGCCTTATCAAGAACATCAGGTCTGTTGGTACCAGC 82101
Query 11565 AATGACTACAA--TGC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621
| || || | ||| | || | ||| || |||||||| || || |||| ||| ||
Sbjct 82100 GAGAACAACCACTTGCTCGGT---AGTGTTAAATCCGTCCATCTCGGTAAGAATCTGATT 82044
Query 11622 GATCGTCTGTTCACGCTCATCGTTGG-AGGGCATA-----CCA-CCTGCCGAACGCTTCT 11674
|| || ||| || |||||||| | || | ||| ||| || | || |
Sbjct 82043 GAGAGTGGCTTCTCGTTCATCGTTTCCACCGCCGAATGATCCAGCCTTCCCA-CGAGCTT 81985
Query 11675 TACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT 11734
| |||| |||||| |||||||||||||| | ||||| || ||| | ||||
Sbjct 81984 TCCCGATAGCGTCGATCTCATCGATGAAGATAATACAAGGCGTGTTCTTTCTTGCCATAG 81925
Query 11735 CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794
||| | ||||| || | | || || ||||| || |||||||| ||||| | |
Sbjct 81924 TGAATAAATCACGCACCCTCGAAGCACCTACACCAACAAACATCTCCACGAATTCGGAAC 81865
Query 11795 CAG-AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853
| | ||| ||||| ||| || || | ||| ||||||||| | || || || |||||
Sbjct 81864 CGGAAACGCTGAA-GAATGGTACTTGAGATTCACCAGCGGTAGCCTTGGCCAGAAGAGTT 81806
Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906
||||| || ||||| | ||||| |||| ||| ||||| || ||||| |||||
Sbjct 81805 TTACCTGTTCCAGGAGGACCAGAAAGAATGGCACCACGAGGAATCTTTGCACC 81753
Score = 89.7 bits (98), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 781608 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 781667
Query 136777 GGGAACAG-CTTTT 136789
| || ||| |||||
Sbjct 781668 GTGATCAGACTTTT 781681
>seq95
Length=967449
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 668987 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 668928
Query 136777 GGGAACA 136783
| || ||
Sbjct 668927 GTGATCA 668921
>seq52
Length=538554
Score = 86.0 bits (94), Expect = 7e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 458525 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 458466
Query 136777 GGGAACA---GCTTTT 136789
| || || ||||||
Sbjct 458465 GTGATCATTTGCTTTT 458450
>seq47
Length=927642
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 671558 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 671499
Query 136777 GGGAACA 136783
| || ||
Sbjct 671498 GTGATCA 671492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974792599200
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