Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq145 316 2e-81
seq85 140 4e-28
seq59 96.9 4e-15
>seq145
Length=311005
Score = 316 bits (350), Expect = 2e-81
Identities = 1170/1808 (65%), Gaps = 39/1808 (2%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| |||||||| || || ||||| | | |||||| | |
Sbjct 106443 CGGAGGTAGTACATGCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTG 106384
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| |||||| | |||| | ||||| ||| |||||| ||||||
Sbjct 106383 ATCTTGCCCATAGTTGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAG 106324
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766
|||||| | || ||||| | || || | | | || | || ||||| || ||
Sbjct 106323 GCACCACGATCAGCAGCCATCTGAACGA--TGGTACG-CTGGGAGATCTCCCAGACAGTC 106267
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826
||| ||| ||||||||| | || |||| | || |||||| || ||||| || |
Sbjct 106266 TTGTAAAGAGCCTTGATATCGGCAGGAATATTAGGGACATTTTGGATGGAACCTCCATCG 106207
Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886
|| || | | |||||| | | ||||| ||||| || | ||||| || |
Sbjct 106206 GCGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTCAAC 106147
Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946
| ||| || | || || || || | | | || |||||||| |
Sbjct 106146 AACCAAGGGTTAACGACTTGGAATTCACCAGCCAAGACACGTCGGGAGTAGATGTTGGAT 106087
Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006
||||| || || || || || || || | |||||| ||| ||| ||||||||
Sbjct 106086 GTGTATGGCTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGCATA 106027
Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066
|| || | | | ||||||||||||||| | | |||||| ||| ||| | ||
Sbjct 106026 GGAGCAACGAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTGGCC 105967
Query 106067 CAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124
||||| | || | | ||| | ||||||| ||||||| |||| ||| | ||||| |
Sbjct 105966 CAGTCCCAAA-GATCGGTAGGTGTAACCTTCC-ACATATCGTATTGGAGCTCTCCTTGTG 105909
Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGG-GCTTCAGCCAATTCA-CAGCT 106182
| | || ||||| || ||||||| || | ||| || |||| || | ||| ||| |
Sbjct 105908 AAGCTGGGGAACCTTCGTATGTCTCGTAAGTACCATGCTGCTTT-GCAAGCTCAACAGAT 105850
Query 106183 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 106242
|| ||| | ||||| || ||||| || ||||| | ||| | | ||||| ||
Sbjct 105849 GAAGTCAAGGCA-GCGTGGTAGATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCCTC 105791
Query 106243 ATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCA 106301
||| || |||| | || | | | | || ||||| |||||||| || ||||| |
Sbjct 105790 GGGTGACTCGAATGGG-AGTCGAAGAGCTAGGAAGACATCGGCGAGACCCTGGACACCAA 105732
Query 106302 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAAT 106358
| ||||||||||||| || | ||| ||| || || ||| ||| || || | |
Sbjct 105731 CAGCAATAGGTCTGTGACGGAAATTGCTCTTGCGTGC---CTCGGGAACAGGGTAGTAGT 105675
Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418
| |||| |||| ||| | || || |||| || || || ||||| || |
Sbjct 105674 TGATGTCGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACATCGTGAAGCTTCT 105615
Query 106419 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 106478
| | || | ||| | | || ||||| || |||| || || | || ||||| |
Sbjct 105614 GAAAGTCGTAGCTGCCATCATTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCAAGT 105555
Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538
| |||||||| ||| || | ||| || | || ||||| || | ||||| |
Sbjct 105554 TACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACTATCTCTGTGCAGAGATTGGAGC 105495
Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598
| || || || | ||||| || ||||||||| |||||| ||||||||||||||||
Sbjct 105494 TGCGGATGGTACCAAGGTTCTTCTGATTACTCTTTCGGTTGCAAGCATCCTTGTAGAGCA 105435
Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCT 106657
|| | || | || ||||| || || | || ||| || | | ||| | | || | | ||
Sbjct 105434 TGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTCTGGGCCT 105375
Query 106658 GGTACAATGGCGTTGG--CCCGTCCCTCC-GCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
| |||| ||| ||| | ||| | ||||||||||| ||||| || |||||
Sbjct 105374 TG----ATGGTCTTGCGACCCTTGCCTTCTGCCTCGTACTTCTCATAGAGAGCCTCAAAT 105319
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774
|| ||||| | || | ||||| || || || || || | || | |||| |
Sbjct 105318 TCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTGTCCATGTA 105259
Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834
||| || |||||| ||||||||||| || ||||||||||| || | | ||||||||
Sbjct 105258 CCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGAAGAGATCG 105199
Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894
| | ||| | || || | || ||||| ||| | ||||||||||| | || |||
Sbjct 105198 CGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCA 105139
Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTT 106951
|||||||||||||| || |||| |||| || || || | ||| | || |
Sbjct 105138 GCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCCACCCTGGTCA 105079
Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011
||||| | |||||| ||| || || || ||||| |||| |||||| | || | ||
Sbjct 105078 ACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTCCCG 105019
Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071
||||| || ||| || | | |||| | | |||| | || || |||||
Sbjct 105018 TTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCGATACCT 104959
Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131
||||| ||| ||||| ||||| | | ||||| | || || |||| ||| |
Sbjct 104958 CCAGCATTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCGTAAATCCCGTCGATACTG 104899
Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191
|||||||| || |||| | |||||| || | || | | |||||| || ||
Sbjct 104898 TCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTTGTGGTGTGCCGGCGGCA 104839
Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCA 107249
||||||||||| | ||||| || | | |||| |||||| | ||||||||| |
Sbjct 104838 AAGAGGGTTGGAGACGCGTG--TGTAAAGTACTTGCTGGACATTAAATTGTATGTCTCGA 104781
Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309
|| ||||| || |||||||| || |||| ||||| | ||| | ||||| ||| |
Sbjct 104780 TAGCACTCTCAATATCATCCCCGTGAATACCGACAGCCACTCTCATGATCATGTGTTGTG 104721
Query 107310 GTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGA 107368
| ||| | |||| ||||| || |||| || | || ||||||| || ||||
Sbjct 104720 GACGTTCGGCAATCTTGCCCTCGAGACGGAGAAGGTATGATC-TCTCAAGAGTCTTGAAT 104662
Query 107369 CCAAAGTA 107376
||||||||
Sbjct 104661 CCAAAGTA 104654
>seq85
Length=1171154
Score = 140 bits (154), Expect = 4e-28
Identities = 303/448 (68%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| | || |||||||| |||||||||||||| || |||| ||||| |||||
Sbjct 1031024 TAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCATG 1031083
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAA-ATGGGTGGCACCCCAACTTGTTTGAGGAGACG 117104
||||| ||||| || | || || | | | || | | ||| |||||
Sbjct 1031084 AAGTCGAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAG-GAGCAGACG 1031142
Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164
||| | || |||||||||| | |||| ||| |||||| |||| ||| |||
Sbjct 1031143 ATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCACA 1031202
Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224
|| || || || | |||| ||| ||| |||||||| ||||| | | | | | ||
Sbjct 1031203 GGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCGGTAATAACGTCTTG 1031262
Query 117225 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGA-GCTCCACGGCAAACTCCT 117283
|| | || | | || | || ||| ||| | | || |||||| ||
Sbjct 1031263 GACTGCTTGCTTGCTTGGACGATGGTTCAAGTGGGAGAACAAGAGGCA-GGCAAAGTCGG 1031321
Query 117284 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGAC 117343
||||||||| || || ||||| || || || || |||||| || |||||||| ||||
Sbjct 1031322 TGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCAGAC 1031381
Query 117344 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403
| |||||||||||||| | |||| | |||||| |||||||||||||||||||| |||
Sbjct 1031382 CACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCAACAG 1031441
Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAA 117431
||||| |||| || |||| |||||
Sbjct 1031442 CGGCAAAGGCAACGAGACGCTGAGCGAA 1031469
>seq59
Length=800985
Score = 96.9 bits (106), Expect = 4e-15
Identities = 271/409 (66%), Gaps = 8/409 (2%)
Strand=Plus/Minus
Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253
||| || ||||| ||||| | ||||| | |||||| | |||| | || || | ||
Sbjct 82160 ATCGAAACGACCAGGACGCATAAGCGCCTTATCAAGAACATCAGGTCTGTTGGTACCAGC 82101
Query 9254 GATGACAACAA-TACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312
|| ||||| | | || | | | | ||| || |||||||| || | || || || |
Sbjct 82100 GAGAACAACCACTTGCTCGGT-AGTGTTAAATCCGTCCATCTCGGTAAGAATCTGATTGA 82042
Query 9313 TAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCA-CCAGCACTGCGTTG--CTTTCC 9367
||| ||| |||||||| || | | | | | | ||||| | | | ||||||
Sbjct 82041 GAGTGGCTTCTCGTTCATCGTTTCCACCGCCGAATGATCCAGCCTTCCCACGAGCTTTCC 81982
Query 9368 C-ACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAA 9426
| | || || |||||||| ||||||| |||||| || || | | || || |
Sbjct 81981 CGATAGCGTCGATCTCATCGATGAAGATAATACAAGGCGTGTTCTTTCTTGCCATAGTGA 81922
Query 9427 AGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9486
| | ||| || ||||| || || |||||||||||||||||||| || | | |||
Sbjct 81921 ATAAATCACGCACCCTCGAAGCACCTACACCAACAAACATCTCCACGAATTCGGAACCGG 81862
Query 9487 AACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9546
|| || ||| || || | ||||||||| || | || ||| |||||||| ||||
Sbjct 81861 AAACGCTGAAGAATGGTACTTGAGATTCACCAGCGGTAGCCTTGGCCAGAAGAGTTTTAC 81802
Query 9547 CCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
| || || || ||| | || | |||||| || |||||||| || ||
Sbjct 81801 CTGTTCCAGGAGGACCAGAAAGAATGGCACCACGAGGAATCTTTGCACC 81753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979590539360
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