Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq85 91.5 2e-13
>seq85
Length=1171154
Score = 91.5 bits (100), Expect = 2e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062
|| || || || || | ||| |||||||| || | || || |||||||||||||| ||
Sbjct 1031351 TCGTTGGAGAAGGTAAGACCTGGCATCAGACCACGCTTCTTCAACCAGAATATAGAGGCG 1031410
Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122
||||| || || ||||| ||||| || || || ||||| ||||| || | | | |
Sbjct 1031411 AATGAACCGGAGAAGAAGATACCCTCAACAGCGGCAAAGGCAACGAGACGCTGAGCGAAT 1031470
Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172
||| || |||| || |||||| | | ||||| || |||||||| ||
Sbjct 1031471 GTAGAGTCCTTATCTTGGATCCATCTTACGGCCCAGTCGGCCTTCTTCTT 1031520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107647676960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |