Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq145 109 3e-19
>seq145
Length=311005
Score = 109 bits (120), Expect = 3e-19
Identities = 268/400 (67%), Gaps = 6/400 (2%)
Strand=Plus/Minus
Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973
|||| | |||||| || ||| || | |||||||||||| | || || || | ||| |
Sbjct 105257 CATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGAAGAGATCGC 105198
Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033
|| | | ||| || |||||||| |||||| ||||| | ||| ||||| | ||| |
Sbjct 105197 GAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCAG 105138
Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093
||||||||| || | ||||| || ||| ||| | || |||||| || || |
Sbjct 105137 CGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCCACCCTGGTCAA 105078
Query 26094 CGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCG 26152
| ||||| || || | ||||||||| | ||| ||||| ||| | |||| | | |||
Sbjct 105077 CATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAAC-AATACCGTTGGAGTTCCCG 105019
Query 26153 TTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCA 26212
||||||| | ||| | | ||| || | | || ||| ||| | |||||| ||
Sbjct 105018 TTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCGATACCT 104959
Query 26213 CCAGCCCATTTTGAAATAGCTGCACAA-TC-TGAAACTGTATCGAAAATTCCTTTTATGC 26270
||||| || || || |||||| || ||| | |||||| |||| || | || |
Sbjct 104958 CCAGCATTCTTGGAGATCATGGCACAAGTCTTGAGA--GTATCGTAAATCCCGTCGATAC 104901
Query 26271 TATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310
| || | ||||| | | || || || ||||| | |||
Sbjct 104900 TGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTG 104861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039494236300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |