Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq145 311 1e-79
seq85 140 4e-28
>seq145
Length=311005
Score = 311 bits (344), Expect = 1e-79
Identities = 1170/1808 (65%), Gaps = 39/1808 (2%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
|||||||| |||| || ||||||| || | || |||| || ||||| |||| |
Sbjct 104654 TACTTTGGATTCAAGACTCTTGAGA-GATCATACCTTCTCCGTCTCGAGGGCAAGATTGC 104712
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| ||||| ||||| ||||| | || || |||| || |||||||| || |||||
Sbjct 104713 CGAACGTCCACAACACATGATCATGAGAGTGGCTGTCGGTATTCACGGGGATGATATTGA 104772
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
|| | ||||||||| | |||||| |||| | | || ||||| | |||
Sbjct 104773 GAGTGCTATCGAGACATACAATTTAATGTCCAGCAAGTACTTTACA--CACGCGTCTCCA 104830
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
|||||||| || || |||||| | | || | || |||||| | |||| ||
Sbjct 104831 ACCCTCTTTGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGACATG 104890
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||||||| ||| |||| || || | ||||| | | ||||| ||||| |||
Sbjct 104891 AAGGAGGACAGTATCGACGGGATTTACGATACTCTCAAGACTTGTGCCATGATCTCCAAG 104950
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502
||||| ||||| || || | |||| | | |||| | | || |||
Sbjct 104951 AATGCTGGAGGTATCGGTCTGAATGTCCACAGAATCCGTGCCACTGGAGCTTACATTGCT 105010
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| ||||| || | || | |||||| |||| ||||| || || || ||| ||||||
Sbjct 105011 GGCACAAACGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACAGCC 105070
Query 75563 CGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619
| ||||| | || | || | ||| || | ||||| ||||| | || |||
Sbjct 105071 AGATATGTTGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAGCCA 105130
Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679
||||| || ||| || | ||||||||||| | ||| ||||| || | || || | |
Sbjct 105131 TGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAAGTT 105190
Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
|| | | |||||||| | | || ||||||||||| || ||||||||||| ||||||
Sbjct 105191 CGCGCTCGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTGTTGAG 105250
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
|| |||| |||| | || | || || || || || ||||| | || |
Sbjct 105251 AAGAATGGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCTGATGTTTAC 105310
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAG-AGGAGGGTAGAG--CCAATGCG 75856
||||| || ||||| || ||||| ||||| || | || ||| || | ||| |
Sbjct 105311 GGTGACGAATTTGAGGCTCTCTATGAGAAGTACGAGGCAGAAGGCAAGGGTCGCAA---G 105367
Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
|| | | || | | || | ||||| | | || ||| | | || || ||||| ||||
Sbjct 105368 ACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACCGGAAA 105426
Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975
|| | ||||| |||||||||||||| ||| |||||||| || ||||| | || ||
Sbjct 105427 CCCTTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGTAATCAGAAGAACCTTGGTAC 105486
Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
||| ||||| ||||| ||||| || || | || ||| | || ||| ||
Sbjct 105487 CATCCGCAGCTCCAATCTCTGCACAGAGATAGTTGAATACTGTGCACCTGACGAGGTCGC 105546
Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTT 76095
|||||| || ||||| || | || || |||| || ||||| || | | ||| |
Sbjct 105547 TGTTTGTAACTTGGCTTCTCTTGCTCTCCCAACTTACGTCAACCAAAATGATGGCAGCTA 105606
Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155
|| | | | || ||||| || || || |||| || || | ||| ||||
Sbjct 105607 CGACTTTCAGAAGCTTCACGATGTCTGCCAGGTTGTCGTGAAGAACTTGAACAAGATCAT 105666
Query 76156 TGACAGAAATTTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212
|||| || | || || ||| ||| || || ||| ||| | || ||||||||
Sbjct 105667 CGACATCAACTACTACCCTGTTCCCGAG---GCACGCAAGAGCAATTTCCGTCACAGACC 105723
Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTG 76271
||||| | | ||||| || |||||||| ||||| || | | | | || | |||| |
Sbjct 105724 TATTGCTGTTGGTGTCCAGGGTCTCGCCGATGTCTTCCTAGCTCTTCGACT-CCCATTCG 105782
Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331
| ||| || ||||| | | ||| | ||||| || ||||| || ||||| | ||
Sbjct 105783 AGTCACCCGAGGCCAAACATCTCAATATCCAGATCTTCGAGACCATCTACCACGC-TGCC 105841
Query 76332 TGGAGGCGAGTTG-TGAATTGGCTGAAGC-CCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
| || | || ||| | || |||| || ||| | || ||||||| || |||||
Sbjct 105842 TTGACTTCATCTGTTGAGCTTGC-AAAGCAGCATGGTACTTACGAGACATACGAAGGTTC 105900
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAAC 76447
|| || || ||||| | ||| || | ||||||| ||||||| | ||| | | ||
Sbjct 105901 CCCAGCTTCACAAGGAGAGCTCCAATACGATATGT-GGAAGGTTACACCTACCGATC-TT 105958
Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507
| ||||||| | ||| ||| |||||| || | ||||||||||||||| | |
Sbjct 105959 TGGGACTGGGCCACCTTGAAGCAACAAATCAAGCAGCACGGTCTTCGTAACAGTTTGCTC 106018
Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567
| || || |||||||| ||| ||| |||||| | || || || || || ||
Sbjct 106019 GTTGCTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGTGTTTCGAG 106078
Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627
||||||||| | ||||||||| || | | | || ||||| || | || |||
Sbjct 106079 CCATACACATCCAACATCTACTCCCGACGTGTCTTGGCTGGTGAATTCCAAGTCGTTAAC 106138
Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 76687
| | || || || | || ||||||||||| | | |||||| | |
Sbjct 106139 CCTTGGTTGTTGAAGGATCTTGTCGATATGGGTCTCTGGTCAGATAACATGAAGAACCGT 106198
Query 76688 ATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
|| | | || |||||||| |||||| || | |||| || | ||||||||| |
Sbjct 106199 ATCATCGCCGATGGAGGTTCCATCCAAAATGTCCCTAATATTCCTGCCGATATCAAGGCT 106258
Query 76748 CTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804
|| ||| || || ||||| || | || | | | || || | ||||| || |||
Sbjct 106259 CTTTACAAGACTGTCTGGGAGATCTCCCAG-CGTACCA--TCGTTCAGATGGCTGCTGAT 106315
Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATG 76864
|||||| |||||| || || ||| ||||| | |||| | |||||| |||
Sbjct 106316 CGTGGTGCCTTCATCGACCAGTCCCAATCGATGAACATCCACATGAAGGATCCAACTATG 106375
Query 76865 TCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTAC 76924
|||| || | |||||| | | ||||| ||| || || ||||| ||||||
Sbjct 106376 GGCAAGATCACGAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAGACCGGCATGTAC 106435
Query 76925 TATCTCCG 76932
|| |||||
Sbjct 106436 TACCTCCG 106443
>seq85
Length=1171154
Score = 140 bits (154), Expect = 4e-28
Identities = 303/448 (68%), Gaps = 4/448 (1%)
Strand=Plus/Minus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
||||| |||| || |||| ||||| ||| |||||||||||||||||||| ||||||
Sbjct 1031469 TTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCATTC 1031410
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| |||| | |||||||||||||| ||||| |||||||| || |||||| || ||
Sbjct 1031409 GCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAACGAG 1031350
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGC-TCTTCAAGACTTT 65249
|| || ||||| || || ||||||||| || |||||| || | | ||| ||
Sbjct 1031349 CTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGCC-TGCCTCTTGTTCTCCCACTT 1031291
Query 65250 GCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGA 65309
| || | || | | || | |||| | | | | | ||||| |||||||| ||
Sbjct 1031290 GAACCATCGTCCAAGCAAGCAAGCAGTCCAAGACGTTATTACCGAGGCTGTTGAGATCGA 1031231
Query 65310 GAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGAT 65369
| ||| |||| | || || || || ||| ||| |||| |||||| ||| |||
Sbjct 1031230 GCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCTGCTTTGAT 1031171
Query 65370 GTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCAT 65429
| | |||||||||| || | |||||||| ||| | | || | | |
Sbjct 1031170 GAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTC-CTCGCTCTCGGTAACGAGAAGT 1031112
Query 65430 -TTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCA 65488
|| || | || ||||| ||||| ||||| ||||| |||| || |||||||
Sbjct 1031111 ATTACAAGTCCGCCAACCCATTCGACTTCATGGAGAACATCTCTCTTGCCGGAAAGACCA 1031052
Query 65489 ACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||||| |||||||| || | |||||
Sbjct 1031051 ACTTCTTCGAGAAGCGTGTCGCCGACTA 1031024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568377032320
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