Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq85 89.7 9e-13
>seq85
Length=1171154
Score = 89.7 bits (98), Expect = 9e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|||||||| | |||| ||| || || || |||||| || || | ||| ||
Sbjct 581281 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCC 581222
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
|| || || || |||||||||| |||||| || || || || || || || ||||| ||
Sbjct 581221 AACTGCTTACCAGCAAAAATTAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGG 581162
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| || | || || || || || ||||||||||| ||||| ||||| ||
Sbjct 581161 ATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATAGTCTTT 581102
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | || || || || || |||||
Sbjct 581101 CCAGTCAAAGTCTTGACGAAGATCTGCAT 581073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652555708480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |