Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq145 205 8e-48
seq85 120 3e-22
seq58 114 1e-20
>seq145
Length=311005
Score = 205 bits (226), Expect = 8e-48
Identities = 986/1538 (64%), Gaps = 70/1538 (5%)
Strand=Plus/Minus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | ||| || |||||||| ||||| || || || ||| |||||| ||| | ||
Sbjct 106138 GTTAACGACTTGGAATTCACCAGCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGG 106079
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| || | |||||| || || || ||| || | || || ||||| || ||
Sbjct 106078 CTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGCATAGGAGCAAC 106019
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
| | | || || | |||||| |||||||| ||| ||| | | | |||||||||
Sbjct 106018 GAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTGGCCCAGTCCCA 105959
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCA---AACTTGCGGG 138737
| |||| ||||| | |||||||||||||| || | | ||| || || ||
Sbjct 105958 AAGATCGGTAGGTGTAACCTTCCACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGA 105899
Query 138738 ACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT-GCTCGCCTCGA 138796
|| ||||||| | ||||| |||| || | || | ||| | | || |
Sbjct 105898 AC---CTTCGTATGTCTCGTAAGTACCATGCTGCTTTGCAAGCTCAACAGATGAAGTCAA 105842
Query 138797 GCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCT 138856
| ||| | | ||| || || ||| ||||| |||||| | |||||||| ||
Sbjct 105841 G-GCAGCGTGGTAGATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCCTCGGGTGACT 105783
Query 138857 CGTACGGCATGCG--GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGAC 138914
|| | || | || |||| | | ||| | ||||| || || || || || || | |
Sbjct 105782 CGAATGGGAGTCGAAGAGC-TAG-GAAGACATCGGCGAGACCCTGGACACCAACAGCAAT 105725
Query 138915 AGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTCG---ATAGGATAATAGTTTACAT 138970
||| | || || | ||| ||| ||||| || ||| | ||| || ||||| | |
Sbjct 105724 AGGTCTGTGACGGAAATT----GCTCTTGCGTGCCTCGGGAACAGGGTAGTAGTTGATGT 105669
Query 138971 CGATGATTTTGTTTAAATTTCGCACGACCACCTT--AGTCGTATGCTTTAATCGT-TCAA 139027
||||||| ||||| || || |||||| |||| || | | | | || | | | ||
Sbjct 105668 CGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACAT---CGTGAAGCTTCTGAA 105612
Query 139028 AATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGG 139087
| ||||| |||| | || | || |||| || ||| || | || || |
Sbjct 105611 AGTCGTAGCTGCCATCATTTTGGTTGACGT--------AAGTTGG-GAGAGCAAGAGAAG 105561
Query 139088 CTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAAT 139147
| | ||| || || || || ||||| || | | |||||| || || || | || | ||
Sbjct 105560 CCAAGTTACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACTATCTCTGTGCAGAGAT 105501
Query 139148 TACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGT 139207
| | ||| ||||| | || | ||||| || |||||||| |||||||| ||||
Sbjct 105500 TGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCTTTCGGTTGCAAGCATCCTTGT 105441
Query 139208 AAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCC 139267
| ||||| | || | || || || ||| | ||| | ||| | | | ||| |
Sbjct 105440 AGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCA-AAGCTTC 105382
Query 139268 TAG--CTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTT 139321
| | |||| || ||| || | | ||| | ||||||||| || |||||
Sbjct 105381 TGGGCCTTG-ATGGTCTTG-CGACCCTTGCCTTCTGC---CTCGTACTTCTCATAGAGAG 105327
Query 139322 CGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCG 139381
| || ||| |||||||| | |||| |||| || | |||| || || ||||| || |
Sbjct 105326 CCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTG 105267
Query 139382 ACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACA 139441
|||| || ||| || || ||| ||||||| ||||| |||||||| | |||| | |
Sbjct 105266 TCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGA 105207
Query 139442 GCAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGG 139494
| |||||| || |||| | ||||| || | | |||| | | ||||
Sbjct 105206 AGAGATCGCGAGCGCGAACTTCCTCCTTTCCG------TGGTTC-TTTCGGAGATCAAGG 105154
Query 139495 AAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---T 139551
|| ||||| || |||||||||||||| || || ||||| || | || || ||
Sbjct 105153 AACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTA 105094
Query 139552 TTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGA 139611
|| ||||| || || || | || | | || ||||| || || | ||| || | | |
Sbjct 105093 TTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATA 105034
Query 139612 CCGCTCGCTGTTCCGTTGGTGCTACGGATGGGA-CTGTTGCGAGCTCGGACGTCATGTAC 139670
||| | | | ||||| |||| | ||| | || | | || |||| || ||
Sbjct 105033 CCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTG-GCACGGATTCTGTGGAC 104975
Query 139671 ATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGT 139729
||| | ||||| || || || ||||| || | | ||| || | | || ||||
Sbjct 104974 ATTCAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTG-AGAGTATCGT 104916
Query 139730 ATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTA 139789
| || || || ||||| |||| ||| || || |||||||| || ||||| | |
Sbjct 104915 AAATCCCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTT 104856
Query 139790 GTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATC 139848
|| |||||||| ||||| || || ||| |||||| || || | ||| | |||||
Sbjct 104855 GTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGTACTTG-CTGGACATT 104797
Query 139849 AATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGC 139908
|| | ||| || ||||| || ||| ||||||| ||||| |||||||||| |||| |
Sbjct 104796 AAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATACCGACAGCCACTCTC 104737
Query 139909 ATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTC 139968
|| | ||| ||||| |||||||| | | |||||||| || || ||
Sbjct 104736 ATGATCATGTGTTGTGGACGTTCGGCAATCTTGCCCTCGAGACGGAGAAGGTATGATCTC 104677
Query 139969 TCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| || |||||| | |||||||| |||||||||||
Sbjct 104676 TCAAGAGTCTTGAATCCAAAGTATTGGTAGTTGAAATC 104639
>seq85
Length=1171154
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || || || || |||||||| ||| | |||| || | || |
Sbjct 580632 AAGACTCTTACTGGCAAGACCATCACTCTCGAAGTCGAATCATCCGATACCATCGACAAT 580691
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||||||||| || || || ||||||||||| ||||||||||||||
Sbjct 580692 GTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAGCAACGTTTGATCTTC 580751
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
||||| || || || || ||| | | | |||| ||||| ||||| || ||||| ||
Sbjct 580752 GCCGGAAAGCAACTCGAAGATGGCCGCACCCTGTCCGATTACAACATCCAGAAGGAGTCC 580811
Query 24899 ACACTACACTTGGT 24912
|| || ||||||||
Sbjct 580812 ACTCTCCACTTGGT 580825
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || || |||||||| || ||||| || | |
Sbjct 581073 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACTATTACTCTGGAAGTTGAGTCGTCT 581132
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || |||||||| || || || || || || ||||| ||
Sbjct 581133 GACACAATCGACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCACCCGACCAG 581192
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || ||||| || || ||| |||||||| | | || || || |||
Sbjct 581193 CAGAGACTAATTTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACTTTGAGCGACTACAAC 581252
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || || |||||||||| | || |||||
Sbjct 581253 ATCCAGAAGGAGTCTACTCTCCATCTGGTGTTGCGTCTTCGTGGAGG 581299
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || || ||||| || || | | ||||| | || | || ||
Sbjct 580349 ACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCGGACACTATCGACAATGTCAAGAGC 580408
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||| || || || || ||||| || || ||||||||||| || || ||
Sbjct 580409 AAGATCCAAGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTTTGATCTTCGCTGGCAAG 580468
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906
||||| ||||| | | | || ||||| ||||| || |||||||| || || ||
Sbjct 580469 CAGCTCGAGGACGGTCGCACTCTCTCGGATTACAACATCCAGAAGGAATCTACTCTTCA 580527
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || || || || ||||| || ||| | |
Sbjct 580845 ATGCAGATTTTCGTCAAGACTCTGACCGGAAAGACAATCACACTCGAGGTCGAATCATCT 580904
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||||||| ||||| || || || || ||||| ||
Sbjct 580905 GATACTATTGATAACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 580964
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || || || || || || || |||||| | | | |||| |||||||||
Sbjct 580965 CAGAGACTCATTTTCGCTGGAAAGCAACTTGAGGATGGCCGTACCTTGTCTGATTATAAC 581024
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || || ||||
Sbjct 581025 ATCCAGAAGGAGTCTACTCTTCATCTGGT 581053
>seq58
Length=1028984
Score = 114 bits (126), Expect = 1e-20
Identities = 148/203 (73%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 24691 ACTGATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGA 24750
||||| ||| || | || | ||| | ||||| || ||||| || || ||||| |||||
Sbjct 907301 ACTGACTGAC-CGTTCCATAGCTTCGTCAAAACTCTCACCGGAAAGACAATTACCCTCGA 907359
Query 24751 AGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAAT 24810
||||| || |||| || | || | || || |||||||| ||||| || |||||
Sbjct 907360 GGTAGAGTCCTCCGATACGATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAAT 907419
Query 24811 ACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT 24870
|| ||||| || |||||||||||||| || || || ||||| |||||| ||| |
Sbjct 907420 CCCCCCCGACCAGCAACGTTTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGAACTCT 907479
Query 24871 GTCAGATTATAACATTCAAAAGG 24893
|| || || |||||||||||||
Sbjct 907480 TTCCGACTACAACATTCAAAAGG 907502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896677709920
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